Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq19 98.7 3e-15 seq17 93.3 1e-13 >seq19 Length=300009 Score = 98.7 bits (108), Expect = 3e-15 Identities = 215/315 (68%), Gaps = 18/315 (6%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | ||||| ||||||||| ||||| || ||||| || || ||| ||| || Sbjct 118895 CCCATGCTGCGTGTATTCAACAACACTGCTCGTTATGTCGACCAGGGTGGCAACAAGCGA 118954 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT---TGAACGGTTTTTA 255097 || || || ||| | |||||||| ||||| |||||||||||| | ||| ||| | Sbjct 118955 CCTGGTGCATTCGCTATCTACCTTGAGCCCTGGCACGCCGACGTCTTTGA---GTTCCT- 119010 Query 255098 CTGCTGTCCGACAAGACC--GGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTG 255155 || | ||||| | ||| || | |||||| | || || ||| | | | ||| Sbjct 119011 -TGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGAGCTCGTGACCTGTTCCTGGCTC 119069 Query 255156 TCTGGTGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGA--GACC--TGGAGCCTC 255211 ||||| | ||||| |||||| | ||||| ||||| || | | |||| || Sbjct 119070 TCTGGATCCCTGATCTTTTTATG--AAGCGTGT--CGAGAAGAACGGCGAATGGACTCTT 119125 Query 255212 ATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTG 255271 ||||| |||||| | || ||||| | ||||| || |||||||||||||| ||| Sbjct 119126 ATGTGCCCCAACGAGTGCCCTGGTCTCGCCGACTGTTACGGTGACGAGTTTGAGGCTCTG 119185 Query 255272 TATCTGGAGTACGAG 255286 || | |||||||| Sbjct 119186 TACGAGAAGTACGAG 119200 >seq17 Length=315547 Score = 93.3 bits (102), Expect = 1e-13 Identities = 119/163 (73%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768 || || || || ||||||| || || || | || || ||||| |||| |||||||| Sbjct 169351 CGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTT-GCCTCCAT 169293 Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828 ||||||| | || |||||||| || |||| ||||||||||| ||||| || ||| Sbjct 169292 CTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTC 169233 Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871 || || |||||| | || ||| || |||||||| ||| || Sbjct 169232 CCGTGATGAGGGTCTTCACACCGATTTTGCCTGTCTCCTCCAC 169190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588316443116645