Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq19 197 2e-45 seq17 145 9e-30 >seq19 Length=300009 Score = 197 bits (218), Expect = 2e-45 Identities = 1080/1707 (63%), Gaps = 65/1707 (4%) Strand=Plus/Minus Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887 |||| || |||||||||||||| || |||||||| || |||||||| || | ||| Sbjct 120306 GCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGC 120247 Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 117947 || || | ||| | ||| || | |||| | ||| | | || || ||| Sbjct 120246 ATGCTGGTGATCTTACCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 120187 Query 117948 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 118004 || |||||| || || ||||| ||||| | |||| ||| || |||||| Sbjct 120186 TCAATGAAGGCACCACGGTCCGCAGCCATTTG---CACAACCTGTCGCTGAGAAATTTCC 120130 Query 118005 CACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAT 118064 ||||||||| |||| || ||| | ||| | ||||| | ||| || |||| || Sbjct 120129 CACACAGTCTTGTACAGAGCCTTGACATCGGCAGGGATGTTGGGGATGTTCTGGACAGAA 120070 Query 118065 CC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 118121 || | | || ||| | | | ||||||| | | ||||| || || | | Sbjct 120069 CCGTTATCAGCAATGA---TACGGTTCTTCATAGCATCGGACCAAAGGCCCAAGTCGACA 120013 Query 118122 AGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA 118181 ||||||| || || |||||||| || || || || ||| || | | Sbjct 120012 AGATCCTTCAGAAGCCAGGGGTTGACAACCTGGAATTCGCCAGCAAGGACTCGGCGTTGG 119953 Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 |||||||||| ||||| ||||| |||||||| ||||| || | || || | ||| | Sbjct 119952 TAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGACGTGCTG 119893 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTT-TCCCTAATGCGTTC 118300 || || ||||| || || | ||| || |||||||||| ||| | || || | | | Sbjct 119892 GCAGTAGGCATAGGAGCAACGAGTAGACTGTTACGGATACCGTGCGTCTTTACATCCTCC 119833 Query 118301 CTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGG 118358 | | || | |||||||| | | | || | || | | |||||| ||||||||| Sbjct 119832 CGT-AGGGACTCCCAGTCCCAAAGGTCAGAG--GGCTTGACATTCCACATGTCAAACTGG 119776 Query 118359 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 118418 || ||||| | || || || || |||| || || || |||||||| ||| || Sbjct 119775 AGAATACCCTCAGAAGCGGGAGAGCCCTTGAAGGTGGAGTAAGGGCCCTCCTCCTTGGCG 119716 Query 118419 AATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 | | | ||| | | ||||| ||||| || ||||| ||||| || | ||| Sbjct 119715 AGCTGCACAGAGGTGGTA---AGGGCAGCGTGGTAGATTGTCTCAAAGATTTGCTTGTTC 119659 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535 | | ||||| || || || | | || || || |||| || ||| Sbjct 119658 AGCTCACGAGCCTCAGGAGACTCGAAGGGCATGCGAAGTGCAAGGAAGGCATCAGCAAGA 119599 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACG 118595 ||||| || || |||||||| || || || | ||| || || ||||| | ||| Sbjct 119598 CCTTGAACGCCAAGGCCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGCACA 119539 Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTT---GTGATT 118652 || ||| || || || | | |||| || || | |||||| | || | Sbjct 119538 GGGTAATGGTTTACGTCAATGATCTTATTCAGGTT---GCGGACAACGACTCGAGTAACA 119482 Query 118653 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT------TGACATACTTAGGA 118706 || || ||||| | | | || | || || ||||||| ||| | | ||| Sbjct 119481 TCGTGGAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTAATGAAAGA---AGGC 119428 Query 118707 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 118766 || | | ||||| ||||| || |||| | |||||| || |||||| || || Sbjct 119427 AGAGACAAGGACGCAAGATTGCAAACAGCGACCTCATCAGGGGCACAGTACTCAATGATC 119368 Query 118767 TCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 118826 || ||||||| ||| || || ||||| || | ||||||||| || ||| ||| Sbjct 119367 TCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTG 119308 Query 118827 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 118886 || ||||||||| |||||| | || | || ||||| || |||| || |||||| || Sbjct 119307 CAGTGATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCG 119248 Query 118887 TTCCAGA-CATCGGCAGC--TGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTT 118943 | ||| | | || | ||| || | | | ||| | || |||| ||||||||| Sbjct 119247 TACCAAAGCTTCTG-AGCCTTGATAGACTTGCGACCCTTACCCTCTCT--CTCGTACTTC 119191 Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCC--ACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 119001 ||| || || |||||||| ||||| || | || | ||| || || || | | Sbjct 119190 TCGTACAGAGCCTCAAACTCGTCACCGTAACAG--TCGGCGAGACCAGGGCACTCGTTGG 119133 Query 119002 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 119061 |||| | |||| ||||| || || ||| || |||||||| || || || ||||||| Sbjct 119132 GGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCC 119073 Query 119062 AGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 119121 |||| ||| ||| || || ||| || | || || | || || || || | | Sbjct 119072 AGAGAGCCAGGAACAGGTCACGAGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGAT 119013 Query 119122 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTAC 119181 | | || || | || || |||||||| || || ||||| | |||| || || | Sbjct 119012 CAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGAATGCACC---AG 118956 Query 119182 GACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTG 119235 | || ||| |||||| ||||| | |||||| ||| |||||||| ||||| | Sbjct 118955 GTCGCTTGTTGCCACCCTGGTCGACATAACGAGCAGTGTTGTTGAATACACGCAGCATGG 118896 Query 119236 GAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACAT 119295 ||| | || | ||| || || || || ||| ||| | |||| | || Sbjct 118895 GAACCACGCCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATTC 118836 Query 119296 CGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGAC 119355 ||| | || | |||||||| || ||| ||| || || || || | |||| Sbjct 118835 GGTGAACGTTTAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGG 118776 Query 119356 TGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 119415 || ||||||| || || || ||| |||| | ||| |||||||| |||| | Sbjct 118775 TGTCGTAGATACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCATGAGGACAGCT 118716 Query 119416 GAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG-- 119473 ||||| || ||||| |||||||| || || || | || || ||| | | |||| Sbjct 118715 GAGGCTGAGGGGTACCGGCGTTGAAAAGTGTGGGGGAAGCATGAGTGA--AGAACTTGCT 118658 Query 119474 GGACATCTTGTCGTAGGTCTCCAAGAC 119500 |||||| || ||| ||||||||||| Sbjct 118657 GGACATGAGGTTGTATGTCTCCAAGAC 118631 >seq17 Length=315547 Score = 145 bits (160), Expect = 9e-30 Identities = 533/815 (65%), Gaps = 21/815 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786 ||||| |||| ||||||||||| ||||| ||||| || ||||| ||| |||||||| Sbjct 168915 TAGTCGGCAACGCGCTTCTCGAAAAAGTTGGTCTTGCCA-CCAAGAGAGATGTTCTCCAT 168973 Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACT-CCAATCTGTTTGAGGAGA 129844 || || || ||||| | | || | | | || || | || | ||| ||| Sbjct 168974 GAAGTCGAAGGGGTTTGTGGCCTTGTACACCTTCT--CATTACCGAGAGCAACGAGCAGA 169031 Query 129845 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTA 129904 ||||| | ||| |||| ||||||| ||| | ||||||||| || | || | Sbjct 169032 CGATCAGCCACGAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCTAGAAGACCA 169091 Query 129905 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCG 129964 || ||||| || || | |||| ||| ||| ||| || || || | |||| | Sbjct 169092 CAAGGGAGAGCCTCGGTAAGGAACTCCTGCTCGATGGTAACGGCATCGGTGATGATGTCC 169151 Query 129965 TGAATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 130021 || || ||| | ||| || ||| || | || | || ||| || |||||| Sbjct 169152 TGGATCATCTGCTTGCTGGCACGTCCCTTAAGGTGAGAGTGGAGGAGA--CA-GGCAAAA 169208 Query 130022 TCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 130081 || ||| |||||||| |||||||||||||| || || |||||| |||||| |||||| Sbjct 169209 TCGGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATG 169268 Query 130082 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 130141 || || |||||||| | |||||| || | ||| | || ||||||||| ||||| Sbjct 169269 AGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCA 169328 Query 130142 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTT 130200 ||| || || |||| ||||| | |||||| ||| | | | |||| | | ||| Sbjct 169329 ACAGCAGCAAAGGCAACAAGACGTTGAGCAAATGAG-GAGTCCTTGTCCTGGATCCATCG 169387 Query 130201 CATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTC 130260 || ||||| | ||||| || ||| || || | || | | || | ||||| | Sbjct 169388 AATGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTTGAAGAGGTA 169447 Query 130261 CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATG 130320 | ||| | || || |||||||| |||| ||||| || ||||| || || Sbjct 169448 TGTTCTTTGGGCAGGCTCCTTGATGTAGGTATCAATGAGCAGGGAGTATGTCTCAGAGTG 169507 Query 130321 GACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCT 130379 || | | ||| || | ||| | ||||||| | || || ||| ||||| |||| Sbjct 169508 GATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGATCTGGACCT 169566 Query 130380 CATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 130438 | | || ||| | | | | ||||| || || |||||||| |||| || || Sbjct 169567 C-GCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCGGAGGCAGCGAAGAAA 169625 Query 130439 GCCAGGATATACTTTATGAATTTCTGTTCAT-TCTCGTTCA--GGGTCTTCCAGTCGTCA 130495 || || || | ||||| ||| |||| | | || | || | |||||||||| Sbjct 169626 GCAAGAATGTGGGAGATGAAGAACTGCTCATCTGTAGTCAAACGGTTGTTCCAGTCGTGG 169685 Query 130496 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||||| || ||||| | |||||| || ||||| Sbjct 169686 AGATCCTTGGAAAGATCAATCTCCTCGGCTGTCCA 169720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618427771047160