Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq19 194 2e-44 seq17 122 1e-22 seq15 109 6e-19 seq156 96.9 4e-15 >seq19 Length=300009 Score = 194 bits (214), Expect = 2e-44 Identities = 535/808 (66%), Gaps = 23/808 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| | ||||| || || | || || || || || || || |||| Sbjct 118574 CCTCAGCACATGATTATGCGTGTTGCTGTTGGCATCTGGGGTGATGATATCGAGCGTGTC 118633 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 |||||||||||| || |||||| |||| | | ||| ||| || | || || || | Sbjct 118634 TTGGAGACATACAACCTCATGTCCAGCAAGTTCT--TCACTCATGCTTCCCCCACACTTT 118691 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| || ||||| || || || ||||| ||||||||| ||| | ||||||| Sbjct 118692 TCAACGCCGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTCGATATGAAGGAGG 118751 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || |||||||||| | || || | | ||||| || || ||| ||||| Sbjct 118752 ACAGCATTGACGGTATCTACGACACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTG 118811 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | |||||||| | || | || | | |||| | ||| ||| || || | Sbjct 118812 GTGGTATTGGCTTAAACGTTCACCGAATCCGTGCCACTGGCTCTTACATTGCCGGTACCA 118871 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | ||| || | || | |||| ||||| || ||||| ||| ||| || || |||| Sbjct 118872 ACGGTACTTCCAACGGCGTGGTTCCCATGCTGCGTGTATTCAACAACACTGCTCGTTATG 118931 Query 104580 TAAATCAAGCTGGGCGTCGAAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGC 104633 | | || | ||| | | ||| || || |||| |||| |||||||| |||| Sbjct 118932 TCGACCAGGGTGG-CAAC--AAGCGACCTGGTGCATTCGCTATCTACCTTGAGCCCTGGC 118988 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| || || | ||||||||||| | || ||||| ||| | ||||||| || Sbjct 118989 ACGCCGACGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGAG 119048 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 || || || ||| ||||||||||| || ||||| || |||||| | || ||| ||| Sbjct 119049 CTCGTGACCTGTTCCTGGCTCTCTGGATCCCTGATCTTTTTATGAAGCGTGTCGAGAAGA 119108 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGT--GGG 104811 ||| | ||| |||| | || || || || ||||||||| |||| | || || Sbjct 119109 ACGGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTCGCCGA--CTGTTACGG 119166 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGT 104871 ||| |||||||| || || ||| ||||||||| ||| ||| || | | || | | Sbjct 119167 TGACGAGTTTGAGGCTCTGTACGAGAAGTACGAGAGAGAGGGTAAGG-GTC-GCAAGTCT 119224 Query 104872 GCCA--GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 || ||| | || | | ||| | || |||||| || | || || ||||| || | || Sbjct 119225 ATCAAGGCT-CAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGAAACCC 119283 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 | |||||| ||||| || ||| |||| ||||| || |||||||| | ||| || Sbjct 119284 CTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACCAT 119343 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATC 105016 | || ||||| || || || || ||| Sbjct 119344 CCGAAGCTCCAACCTGTGCACTGAGATC 119371 >seq17 Length=315547 Score = 122 bits (134), Expect = 1e-22 Identities = 161/221 (73%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 94736 TTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGT 94794 |||| || || | |||||| || || ||||| || ||| | | |||| | | | | Sbjct 169422 TTCCTTGCATCCGAAAGAAGGCTGACTGGGCCATTCGATGGATCCAGGACAAGGACTCCT 169363 Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 | |||||| | || || | || ||||| ||||||||||||||||||| ||| || Sbjct 169362 -CATTTGCTCAACGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCC 169304 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 || | | || | |||||||||||||| || |||||||| ||||| |||||||||| Sbjct 169303 TTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAAC 169244 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||| ||||| ||||| ||||| || ||| || ||||| Sbjct 169243 GAGCTCATCTCCCGTGATGAGGGTCTTCACACCGATTTTGC 169203 >seq15 Length=326598 Score = 109 bits (120), Expect = 6e-19 Identities = 184/261 (70%), Gaps = 9/261 (3%) Strand=Plus/Plus Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763 || |||||||| || ||||||| ||| || || ||| | |||| | | | || ||| Sbjct 156854 GCGTCAATCTCGTCGATGAAGATGATACAAGGAGCATTCTTGCGACCTTCGGCGAACAGA 156913 Query 9764 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACA 9822 || ||||||||| | || ||||||||||||||||| || || | | || ||| Sbjct 156914 TCTCGTACACGCGAAGGTCCGACACCAACAAACATCTCAACGAATTCGGAACCGCTCACA 156973 Query 9823 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9882 | || |||||| || ||| ||||| || |||| ||| || | |||||||| || Sbjct 156974 CT-GAAGAAGGGCACTCCAGACTCACCAGCCGTGGCCTTGGCAAGCAACGTCTTACCAGT 157032 Query 9883 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC---ACTTCCAAAGTA 9939 ||| || || || | || |||||||||||| ||||||||||| || |||| | Sbjct 157033 ACCGGGGGGTCCAGCCAAGATGGCACCTCGTGGGATCTTGGCGCCTAGCTTTTCAAACT- 157091 Query 9940 TCTCTCAGGTTGCTT-AAGAA 9959 ||||||| ||||| ||||| Sbjct 157092 --TCTCAGGCTGCTTCAAGAA 157110 >seq156 Length=87667 Score = 96.9 bits (106), Expect = 4e-15 Identities = 209/301 (69%), Gaps = 14/301 (5%) Strand=Plus/Minus Query 9697 TCCCACGGCATCAATCTCATCAATGAAGACGATG-CATGG---TTGATTTTCGCGAGCGA 9752 ||| | ||| || | ||||| || ||||| ||| || || ||| |||| ||| || | Sbjct 16074 TCCAATGGCGTCGAGTTCATCGATAAAGACAATGGCAGGGGACTTGTTTTTGGCG-GC-A 16017 Query 9753 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9812 | ||||| || || || |||||||| || ||||||||||| ||||| |||| | | Sbjct 16016 GTG--AAGAGCTCGCGGACTCGCTTGGCACCAACACCAACAAAGATCTCGTCAAA-CTCG 15960 Query 9813 CGGCGGAACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871 | | |||| | || ||| || ||| | |||||| |||| |||||| || ||||| Sbjct 15959 CTACCAGACATGTAGAAGAAAGGAACACCGGCTTCACCGGCAACGGCTCGAGCAAGAAGC 15900 Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC-ACT 9930 |||||||| ||||| || ||| | |||||| | || |||| |||||| || | Sbjct 15899 GTCTTACCAGTACCGGGGGGACCAACCAGGAGGACGCCCTTGGGAAGCTTGGCACCGAGG 15840 Query 9931 TC-CAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGG 9989 || | || | ||||||| | ||| | ||| || || | ||| | | ||| || |||| Sbjct 15839 TCGCTAA--ACTTCTCAGGGTTCTTCAAAAACTCGACGACTTCCTGGAGTTCTTCCTTGG 15782 Query 9990 C 9990 | Sbjct 15781 C 15781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583253793579640