Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq151 196 1e-44 seq81 147 7e-30 seq126 114 4e-20 seq82 107 6e-18 seq96 105 2e-17 seq428 93.3 1e-13 seq452 87.8 5e-12 >seq151 Length=91040 Score = 196 bits (216), Expect = 1e-44 Identities = 700/1081 (65%), Gaps = 25/1081 (2%) Strand=Plus/Plus Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 || || || || || || || |||||| |||| || || |||| ||| | || ||||| Sbjct 41070 GATATCATCGCCAACGACCAGGGTAACCGAACTACCCCCTCATTCGTCGGTTTCACCGAC 41129 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 || |||||| |||| |||||| | || || || || | || || || | || || Sbjct 41130 ACCGAGCGTCTGATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCAGAACACC 41189 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTT-----TTCTGACAAATCTACACAA 349435 || || || || |||||| | || ||| | ||||| | |||| || || Sbjct 41190 GTCTTCGACGCCAAGCGATTGATCGGTCGCAAGTTCGCCGATGCTGAGG--TC----CAG 41243 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 | || | || || || ||||| || |||| | | ||| | || || || | || Sbjct 41244 GCCGACATGAAGCACTTCCCTTTCACAATTGT-CGACAAGGC--TGGCAAGCCCGTCATC 41300 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGT 349554 |||||||| | || ||||| || || | || ||| || || || || | ||| | Sbjct 41301 GAGGTTGAGTTCAAGGGTGAG-AAGAAGACCTTCACCCCTGAGGAGATCTCCGCCATGAT 41359 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | || ||| || | |||||| | || | ||||| || || | | || || Sbjct 41360 CCTCACCAAGATGCGTGAGACTGCTGAGTCTTACCTTGGTGAGACTGTCAACAACGCCGT 41419 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 | | ||||| || ||||| || || || | ||||| || || || || ||||| Sbjct 41420 TGTCACTGTCCCCGCCTACTTCAACGACTCTCAGCGCCAGGCTACCAAGGACGCTGGTCT 41479 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 |||||| || | || ||||| |||| || || || || || ||||| || ||||| || Sbjct 41480 CATTGCCGGCCTCAACGTTCTCCGAATCATCAACGAGCCTACCGCTGCTGCCATTGCCTA 41539 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || || || | | ||| || || | ||||| || ||| | |||||||| Sbjct 41540 CGGTCTCGACAAGAAGGTTGAGGGCGAGCGCAACGTCCTTATCTTCGATCTTGGTGGTGG 41599 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 |||||| ||||| || || || || |||| ||||| || || || || || | || || Sbjct 41600 TACTTTCGATGTCTCTCTCCTCACCATTGAGGAGGGTATCTTCGAGGTCAAGTCTACCGC 41659 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 ||||| || || | ||||| |||||||| ||||| ||||| || || || ||||| Sbjct 41660 CGGTGACACTCACTTGGGTGGTGAAGATTTCGATAACCGTCTGGTCAACCACTTCGTTAA 41719 Query 349915 AGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCC 349973 || || ||||| |||| ||||| || | || ||| | | || | || |||| Sbjct 41720 CGAGTTCAAGCG-AAAGCATAAAAAGGACTTGGGCACCAATGTTCGTGCTCTCCGACGCC 41778 Query 349974 TAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTG 350033 | |||| || ||||| ||||| ||||| | | || ||| | | || ||||| || | Sbjct 41779 TTCGAACCGCTTGTGAGCGTGCCAAGCGAACTCTCTCTTCTTCCGCTCAGACCTCCATCG 41838 Query 350034 AAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTG 350093 | || || |||||| || || | || |||| | || || || |||||||| || | Sbjct 41839 AGATCGACTCTCTTTTCGAGGGTATTGACTTCTACACCTCCATCACCCGTGCTCGTTTCG 41898 Query 350094 AAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAG 350153 | || | || |||||| || || | || || | || || || || | | | Sbjct 41899 AGGAGCTCTGCCAGGATCTCTTCCGATCTACTATCCAGCCCGTCGACCGTGTCCTCACTG 41958 Query 350154 ATGCAAAAATGTCCAAAAATCAGATTG---ATGAAGTAGTTTTAGTTGGTGGTTCTACAC 350210 | || || | || | || || ||| | || | || | || ||||| ||||| | Sbjct 41959 ACGCCAAGA--TCGACAAGTC-CCTTGTCCACGAGATCGTCCTCGTCGGTGGATCTACCC 42015 Query 350211 GTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGAT 350270 |||| || || || || | | | || | || || || || || || | | Sbjct 42016 GTATCCCCCGTGTCCAGAAGCTCATCACCGACTACTTCAACGGAAAGGAGCCCAACAAGT 42075 Query 350271 CAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTG 350330 | || || || ||||| |||||||| || ||||| ||||| ||||| ||||| | |||| Sbjct 42076 CCATCAACCCCGATGAGGCTGTTGCCTACGGTGCCGCTGTCCAGGCTGCTATTCTCTCTG 42135 Query 350331 G 350331 | Sbjct 42136 G 42136 >seq81 Length=153540 Score = 147 bits (162), Expect = 7e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || ||||| || ||||| ||||||||||| || || || || || Sbjct 144159 ACCACCACGAAGACGAAGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGA 144100 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| ||||| || || ||||| ||||| || || ||||| |||||||| Sbjct 144099 GAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCAGGAGG 144040 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||| ||||| || ||||| || |||| || || || || || | |||||||| || || Sbjct 144039 AATACCTTCCTTGTCCTGGATCTTAGACTTGACGTTGTCGATAGTATCAGATGACTCGAC 143980 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||||| |||| ||||| || || || || || || Sbjct 143979 CTCAAGGGTAATGGTCTTGCCAGTAAGGGTCTTGAC 143944 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || ||||| ||||||||||| || || || || Sbjct 143880 CATACCACCACGAAGGCGAAGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTC 143821 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || || || || || || || || || || || | || ||||| ||||| Sbjct 143820 AGAGAGGGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGG 143761 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| ||||| || ||||| || || | || ||||| || || | |||||||| || Sbjct 143760 AGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCAGATGACTC 143701 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| ||||| || || || || || || ||||| Sbjct 143700 GACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 143650 >seq126 Length=117423 Score = 114 bits (126), Expect = 4e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || || || ||||||||||| || || || || || || Sbjct 31080 ACCACCACGGAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 31021 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| || || || || ||||||||||| || || ||||| || || || Sbjct 31020 CAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGG 30961 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||| || || || ||||| || || | || || || ||||| | || || | || || Sbjct 30960 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCAC 30901 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || || || ||||||||||| Sbjct 30900 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 30853 >seq82 Length=153091 Score = 107 bits (118), Expect = 6e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | |||||||| || ||||||||||| || || || || || || Sbjct 10471 ATACCACCACGGAGACGGAGAACAAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCG 10412 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | ||||| ||||| || || || || ||||| ||||| | || || || || || Sbjct 10411 GAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGG 10352 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 ||||| || || || ||||| || || | || ||||| || || | || || | || Sbjct 10351 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCG 10292 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 || || || || | ||||| || || || || || || ||| Sbjct 10291 ACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 10250 >seq96 Length=142780 Score = 105 bits (116), Expect = 2e-17 Identities = 177/255 (69%), Gaps = 6/255 (2%) Strand=Plus/Minus Query 378222 TCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACG 378281 |||||| ||| |||||||||| | ||| || || ||||||||||| | ||| | || Sbjct 56895 TCGTCGCTGAATGTAACCAGTTTCAGCAGTCTTGACCGCAGTATCAATAAGACCTTCTCG 56836 Query 378282 ACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTC 378341 |||| |||| || |||||||| || || ||||||| || |||| || | || |||| Sbjct 56835 ACCAGCCATGGCGTGGAAGAAAAACTCGCTAGGAGTCAGGCCACGAAGGTAAGAGTTCTC 56776 Query 378342 AATAAATCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATT 378401 | || || | || | || || | ||||| || || | ||||| | ||||| | Sbjct 56775 GACGAAACCACGAGCTTCGGGAGAGTAATCATCCTTGGTGAAGTGAGGCAGAGTACGGTA 56716 Query 378402 CTCAAACCCATATGGAATTCGTTTTCCATCAACATTCTGTTGAC---CAAGTGCAGAAAC 378458 || ||| || | ||||| || ||||| || ||| | || |||| |||| |||| Sbjct 56715 CTTAAAACCGAAAGGAATGCGCTTTCCTTCGACAATTTGCTGACCGACAAGCGCAG---T 56659 Query 378459 CATTTGAGCAATATT 378473 ||| || | |||||| Sbjct 56658 CATCTGTGAAATATT 56644 Score = 93.3 bits (102), Expect = 1e-13 Identities = 103/137 (75%), Gaps = 3/137 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || |||||||| | || || ||| ||||| | |||||||| || ||||| || || Sbjct 57677 CGAGGCACACCGAGGGTGACGTTC---TTAGAAGACACACCAGCGAAATGGAAGGTGTTC 57621 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||||| | ||||||||||| ||||| || || | ||| ||||||||||| Sbjct 57620 AGTGTCATCTGAGTGGCAGGCTCACCAATGGACTGGGCAGCCAAAACACCAACCATTTCG 57561 Query 377578 CCAGGATTGACAATAGC 377594 ||||| ||||| | ||| Sbjct 57560 CCAGGGTTGACGAAAGC 57544 >seq428 Length=808 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| |||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 578 GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 519 Query 235950 CCCAGCATCTCCAT 235963 ||| || ||||||| Sbjct 518 CCCTGCTTCTCCAT 505 >seq452 Length=726 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||||||||||||| |||||| | | Sbjct 532 GGGGATGTAGCGCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACAGGGATCGATA 591 Query 235950 CCCAGCATCTCCA 235962 ||| || |||||| Sbjct 592 CCCTGCTTCTCCA 604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515235742956683