Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq19 394 1e-104 seq17 111 2e-19 >seq19 Length=300009 Score = 394 bits (436), Expect = 1e-104 Identities = 933/1397 (67%), Gaps = 22/1397 (2%) Strand=Plus/Minus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566 ||| ||||| || ||| ||||| ||||||| |||| ||||| |||||||| ||| Sbjct 119980 GAATTCGCCAGCAAGGACTCGGCGTTGGTAGATATTGGAGGTGTAGGGCTCGAAGCACTC 119921 Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626 |||||| || | ||||| | || ||| || ||||| || || || |||||| || Sbjct 119920 GTTGTTGCCAAGAATCTGCGACGTGCTGGCAGTAGGCATAGGAGCAACGAGTAGACTGTT 119861 Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAGG------CCGTCCCAAAATTCATTCGC 78680 || | ||| |||||||| | || || |||| | |||||||| ||| | Sbjct 119860 ACGGATACCGTGCGTCTTTACATCCTCCCGTAGGGACTCCCAGTCCCAAAGGTCAGAGGG 119801 Query 78681 CGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGT 78740 | || ||||||||| || || |||||||| || || || || |||||||| || Sbjct 119800 CTTGACATTCCACATGTCAAACTGGAGAATACCCTCAGAAGCGGGAGAGCCCTTGAAGGT 119741 Query 78741 CTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCA-TGACTCGAGCAGGGCCGCGTGGTACA 78799 ||||| ||||||||||||||||| | ||| || | ||||| |||||||| | Sbjct 119740 GGAGTAAGGGCCCTCCTCCTTGGCGAGCT-GCACAGAGGTGGTAAGGGCAGCGTGGTAGA 119682 Query 78800 CAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGA 78859 | ||| ||||| |||||| ||||| || |||| | ||||| | | || | Sbjct 119681 TTGTCTCAAAGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCGAAGGGCATGCGAA 119622 Query 78860 GCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGT 78919 | | |||| |||| || || || || ||||| | | || |||||||| ||||||| Sbjct 119621 GTGCAAGGAAGGCATCAGCAAGACCTTGAACGCCAAGGCCAATGGGTCGGTGACGCATGT 119562 Query 78920 TGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTAC 78979 |||| || || ||| | | |||||| ||| || |||| |||||||| | Sbjct 119561 TGCTGTTGCGAGCCTCTTGCACAGGGTAATGGTTTACGTCAATGATCTTATTCAGGTTGC 119502 Query 78980 GCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATC---AAAATGAT-TTCCT--T 79033 | ||||| ||||| || |||| | || ||| || || || ||| | | Sbjct 119501 GGACAACGACTCGAGTAACATCGTGGAGCTTCTTGAAGTCGTAGCAAGCATCTTCATAGT 119442 Query 79034 TGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAG 79093 | ||||||| || || ||| || || || ||||| || || ||| || ||| | Sbjct 119441 TAATGAAAGAAGGCAGAGACAAGGACGCAAGATTGCAAACAGCGACCTCATCAGGGGCAC 119382 Query 79094 AAACCTCGATGATTTCTGTGCACAAATTAGACGACTT--GATGGTGCCGATGTTCTTCTG 79151 | ||| ||||| || ||||||| || || ||| |||||| || | |||||| || Sbjct 119381 AGTACTCAATGATCTCAGTGCACAGGTTGGA--GCTTCGGATGGTACCAAGGTTCTTTTG 119324 Query 79152 GTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTG 79211 ||||||||| ||| ||| ||||||||| |||| | || | |||||||| ||| Sbjct 119323 GTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTG 119264 Query 79212 ACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTG 79271 || ||||| | ||| ||| | | | | ||| || | ||| | ||||| Sbjct 119263 GGCCTCGAGAATGGCGTACCAAAGCTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTC 119204 Query 79272 TGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACA-TCGGGCAGGCCCG 79330 | ||||| || ||||| | | || | || || || ||| |||| || || | Sbjct 119203 TCTCTCGTACTTCTCGTACAGAGCCTCAAACTCGTCACCGTA-ACAGTCGGCGAGACCAG 119145 Query 79331 GGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGA 79390 ||||||||| |||||||| || ||| || ||| |||||| || || ||| || | Sbjct 119144 GGCACTCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAA 119085 Query 79391 GGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGT 79450 | || |||||||| || ||| ||| ||||| || || | |||||| | || |||| Sbjct 119084 GATCAGGGATCCAGAGAGCCAGGAACAGGTCACGAGCTCGGACCTCCTCCTTACCGTGGT 119025 Query 79451 TCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGA 79510 || || || || || || || | || |||||||||||| ||||| || ||||| |||| Sbjct 119024 TCTTTCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGA 118965 Query 79511 ACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTC 79570 | | ||| |||||| ||| ||||||| ||| || || || ||||||||||| || | Sbjct 118964 ATGCACCAGGTCGCTTGTTGCCACCCTGGTCGACATAACGAGCAGTGTTGTTGAATACAC 118905 Query 79571 GGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCG 79630 | |||||||| || | ||||| || ||||| || ||| || | || | | Sbjct 118904 GCAGCATGGGAACCACGCCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGG 118845 Query 79631 CCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCAC 79689 | || || | | | | || | || || || || | | |||||| || || || Sbjct 118844 CACGGAT-TCGGTGAACGTTTAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAA 118786 Query 79690 TCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAG 79749 |||||| || |||||||| || || || ||| ||||||||| |||| |||||||| Sbjct 118785 GTCTTGAGGGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCAT 118726 Query 79750 CTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG 79809 |||| ||| || | |||||||||||||| || || || | || || |||||| Sbjct 118725 GAGGACAGCTGAGGCTGAGGGGTACCGGCGTTGAAAAGTGTGGGGGAAGCATGAGTGAAG 118666 Query 79810 AACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATG 79869 ||||| | ||| || | ||| |||||| ||| ||| || || || || |||| Sbjct 118665 AACTTGCTGGACATGAGGTTGTATGTCTCCAAGACACGCTCGATATCATCACCCCAGATG 118606 Query 79870 CCGACCGCGACGCGCAT 79886 || || || || ||||| Sbjct 118605 CCAACAGCAACACGCAT 118589 Score = 342 bits (378), Expect = 6e-89 Identities = 919/1388 (66%), Gaps = 28/1388 (2%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 |||||| || | | ||||| || || || |||||| || || || || ||| ||| Sbjct 118574 CCTCAGCACATGATTATGCGTGTTGCTGTTGGCATCTGGGGTGATGATATCGAGCGTGTC 118633 Query 19163 CGCGAGACATACGACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221 ||||||||| |||| ||| |||| ||||||||||| || || | || || ||||| Sbjct 118634 TTGGAGACATACAACCTCATGT-CCAGCAAGTTCTTCACTCATGCTTCCCCCACACTTTT 118692 Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281 |||||||||||| | || ||| |||| || ||||| || | ||||||||| || Sbjct 118693 CAACGCCGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTCGATATGAAGGAGGA 118752 Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGG 19341 ||||||||| || |||||||| || |||||| || || || |||||| | | || Sbjct 118753 CAGCATTGACGGTATCTACGACACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGG 118812 Query 19342 GGGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGA 19400 ||||| || | || | | | | ||||| | | ||| | || || || | Sbjct 118813 TGGTATTGGCTTAAACGTTCACCGA-ATCCGTGCCACTGGCTCTTACATTGCCGGTACCA 118871 Query 19401 ACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACG 19460 |||| || |||| | || || ||||| || || ||||||||||| || | || | Sbjct 118872 ACGGTACTTCCAACGGCGTGGTTCCCATGCTGCGTGTATTCAACAACACTGCTCGTTATG 118931 Query 19461 TCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACG 19520 || ||||||| ||| ||| || || | ||||| |||||||| ||||| ||||||| Sbjct 118932 TCGACCAGGGTGGCAACAAGCGACCTGGTGCATTCGCTATCTACCTTGAGCCCTGGCACG 118991 Query 19521 CGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTC 19580 | |||||| | || ||||| || || || |||||| ||| | |||||| | || || Sbjct 118992 CCGACGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGAGCTC 119051 Query 19581 GCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACG 19640 | ||||| ||| ||| | ||||| || || || || ||| || || |||||| ||| Sbjct 119052 GTGACCTGTTCCTGGCTCTCTGGATCCCTGATCTTTTTATGAAGCGTGTCGAGAAGAACG 119111 Query 19641 AAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGG 19700 |||||| || |||||||| |||| |||||||| || ||||| ||||| || | Sbjct 119112 GCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTCGCCGACTGTTACGGTGACG 119171 Query 19701 CGTTCAATGAGTTGTACCGGACTTACG-TAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGG 19759 ||| | | ||||| || |||| || || || || ||| || | Sbjct 119172 AGTTTGAGGCTCTGTACGAGAAGTACGAGAGAGAGGGTAAGGGTC-GCAAGTCTATCAAG 119230 Query 19760 GCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATG 19819 || | | | | ||| || | | ||| | |||| |||||||| | || | |||| Sbjct 119231 GCTCAGAAGCTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGAAACCCCTTCATG 119290 Query 19820 TGCTACAAGGA-CGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAG 19876 ||||||||| | | || ||| |||| || || |||||| | || | ||| ||| Sbjct 119291 CTCTACAAGGATCACTGC-AACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCCGAAG 119349 Query 19877 TCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGT 19936 ||||||||||| ||||| ||||| ||| | || || ||| || || || Sbjct 119350 --CTCCAACCTGTGCACTGAGATCATTGAGTACTGTGCCCCTGATGAGGTCGCTGTTTGC 119407 Query 19937 AATCTGGCGTCCCTGTGCCTGCCGACTTTCGTCA------AGGCCTCCTCCTTCGACTTT 19990 ||||| |||||| ||| ||||| ||||| | | | | | | || |||||| Sbjct 119408 AATCTTGCGTCCTTGTCTCTGCCTTCTTTCATTAACTATGAAGATGCTTGCTACGACTTC 119467 Query 19991 GCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGG 20050 || | |||| || || || ||||| || || |||||| |||| || Sbjct 119468 AAGAAGCTCCACGATGTTACTCGAGTCGTTGTCCGCAACCTGAATAAGATCATTGACGTA 119527 Query 20051 AACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATC 20110 ||| |||||| | | ||| ||||| || ||||| ||||| || || | | Sbjct 119528 AACCATTACCCTGTGCAAGAGGCTCGCAACAGCAACATGCGTCACCGACCCATTGGCCTT 119587 Query 20111 GGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAG 20170 ||||| || || || || || | ||| | || || | | ||||| ||| || Sbjct 119588 GGCGTTCAAGGTCTTGCTGATGCCTTCCTTGCACTTCGCATGCCCTTCGAGTCTCCTGAG 119647 Query 20171 GCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATC- 20229 || || ||||| |||||| ||||| ||| | | |||||||| ||||| || Sbjct 119648 GCTCGTGAGCTGAACAAGCAAATCTTTGAGACAATCTACCACGCTGCCCTTACCACCTCT 119707 Query 20230 GTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGA 20289 |||| | |||||||| ||||| ||||| ||| || |||||||| || ||||| || || Sbjct 119708 GTGC-AGCTCGCCAAGGAGGAGGGCCCTTACTCCACCTTCAAGGGCTCTCCCGCTTCTGA 119766 Query 20290 GGGTATCCTCCAGCCGGACATGTGGGGCGTCA------CTGA-GAATGAGTTTTGGAGCG 20342 |||||| |||||| ||||||||| |||| |||| || | | |||| Sbjct 119767 GGGTATTCTCCAGTTTGACATGTGGAATGTCAAGCCCTCTGACCTTTGGGACTGGGAG-T 119825 Query 20343 CCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGC 20402 |||| || || | ||||| ||||| | || ||| | ||||| || || |||| Sbjct 119826 CCCTACGGGAGGATGTAAAGACGCACGGTATCCGTAACAGTCTACTCGTTGCTCCTATGC 119885 Query 20403 CGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCA 20462 | || ||| || | ||||| | || ||||||||| |||||||| ||||| ||| Sbjct 119886 CTACTGCCAGCACGTCGCAGATTCTTGGCAACAACGAGTGCTTCGAGCCCTACACCTCCA 119945 Query 20463 ACATCTAC 20470 | |||||| Sbjct 119946 ATATCTAC 119953 Score = 86.0 bits (94), Expect = 7e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247 |||| || | ||||||||||| ||||||||||| |||||| || | |||||| | Sbjct 120302 GTGTACGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGCATGC 120243 Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307 | | | ||| ||| | |||| || |||| |||||||| ||||| ||||| || | Sbjct 120242 TGGTGATCTTACCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAA 120183 Query 78308 TGTACGCACCGCGGTCGGCCGCCAT 78332 || | ||||| ||||| || ||||| Sbjct 120182 TGAAGGCACCACGGTCCGCAGCCAT 120158 >seq17 Length=315547 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 59970 TCATTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTC 60028 |||||||| |||||||| | || ||||| ||| || || || ||||||||| || | Sbjct 169363 TCATTTGCTCAACGTCTTGTTGCCTTTGC-TGCTGTTGAGGGTATCTTCTTCAGCGGTGC 169305 Query 60029 GTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAA 60088 || | || ||||||||||| ||||||||||||||||| || |||| |||||||| Sbjct 169304 CTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAA 169245 Query 60089 CGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 |||||| || ||||| || ||||| || || Sbjct 169244 CGAGCTCATCTCCCGTGATGAGGGTCTTCA 169215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548518210845840