Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq19 318 7e-82 seq81 190 2e-43 seq126 170 2e-37 seq82 141 1e-28 seq18 116 4e-21 >seq19 Length=300009 Score = 318 bits (352), Expect = 7e-82 Identities = 1147/1761 (65%), Gaps = 71/1761 (4%) Strand=Plus/Minus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| | || || || ||||||||||| |||||||| || ||||||||| | |||| Sbjct 120306 GCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGC 120247 Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151 || ||| ||| | | || |||| || |||| ||||| ||||||||||||||| Sbjct 120246 ATGCTGGTGATCTTACCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 120187 Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAAT-TGACTTTTGTGGAATTTCCCA 80210 ||||| || ||||| || || ||||||| | || || | | | | ||||||||| Sbjct 120186 TCAATGAAGGCACCACGGTCCGCAGCCATTTGCACAACCTGTCGCT-GAGAAATTTCCCA 120128 Query 80211 TACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAG-ATTTTGCACACTGC 80266 || || |||| |||| | || | || |||| | || || || | Sbjct 120127 CACAGTCTTGTACAGAGCCTTGACA---TCGGCAGGGATGTTGGGGATGTTCTGGACAGA 120071 Query 80267 CACCGTCCTTTACAATTTGA---TTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCA 80323 ||||| | |||| | || |||| || | ||| | || | | | | Sbjct 120070 -ACCGTTATCAGCAATGATACGGTTCTTCATAGCATCGGACCAAAGGCCCAAGTCGACAA 120012 Query 80324 GATCTTTCACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCA 80380 |||| |||| ||| | | ||| || | || | || || || ||| || || Sbjct 120011 GATCCTTCAGAAGCCAGGGGTTGACAACCTGGA---ATTCGCCAGCAAGGACTCGGCGTT 119955 Query 80381 GATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGC 80440 | || | || | ||||| ||||| || ||||||||| || || ||||| | ||||| Sbjct 119954 GGTAGATATTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGACGTGC 119895 Query 80441 TCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCT 80500 | || || ||||| || | || | || || || | |||||| |||| | ||||| Sbjct 119894 TGGCAGTAGGCATAGGAGCAACGAGTAGACTGTTACGGATACCGTGCGTCTTTACATCCT 119835 Query 80501 CGCGCA---AATCTGA---CCAAAAATCAACCCCAACGCTGTGACC--CCACATGTCGTG 80552 | || | | || | ||||| ||| | ||| |||| ||||||||| Sbjct 119834 CCCGTAGGGACTCCCAGTCCCAAAGGTCAG----AGGGCT-TGACATTCCACATGTCAAA 119780 Query 80553 CTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTT 80612 ||| | || ||||| || || ||||| ||| ||| || ||| ||||||||| ||| Sbjct 119779 CTGGAGAATACCCTCAGAAGCGGGAGAGCCCTTGAAGGTGGAGTAAGGGCCCTCCTCCTT 119720 Query 80613 GGCCAGCT-CACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGT 80671 ||| |||| |||| || ||||||| ||||| || || |||||||| ||||| Sbjct 119719 GGCGAGCTGCACA-GAGGTGGTAAGGGCAGCGTGGTAGATTGTCTCAAAGATTTGCTTGT 119661 Query 80672 TCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCA 80731 ||| | || |||| || ||||| | || || | | ||| | ||||| | Sbjct 119660 TCAGCTCACGAGCCTCAGGAGACTCGAAGGGCATGCGAAGTGCAAGGAAGGCATCAGCAA 119601 Query 80732 GGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGA 80790 | || |||||||| | | | || || ||||| ||| |||| | | || ||||| | Sbjct 119600 GACCTTGAACGCCAAGGCCAATGGGTCGGTGACGCATGTT-GCTGTTGCGAGCCTCTTGC 119542 Query 80791 ATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACA 80850 | |||||| ||| || |||| ||||||||||| ||| || || |||||| Sbjct 119541 ACAGGGTAATGGTTTACGTCAATGATCTTATTCAGGTTGCGGACAACGACTCGAGTAACA 119482 Query 80851 TCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCACA---AATGCCGGAAGGC----T 80903 || || || |||| |||||| | | ||||| | |||| |||||| Sbjct 119481 TCGTGGAGCTTCTTGAAGTCGTA-GCAAGCATCTTCATAGTTAATGAAAGAAGGCAGAGA 119423 Query 80904 CAGGGACGCCAGATTGCACACGGCCACCTCTTCA---GCATCTGTAAACTCGACGATTTC 80960 || |||||| |||||||| || || ||||| ||| ||| | || |||| | ||| || Sbjct 119422 CAAGGACGCAAGATTGCAAACAGCGACCTCATCAGGGGCA-CAGT--ACTCAATGATCTC 119366 Query 80961 CGTGCACAAATTAGAAGACTT--AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTG 81018 ||||||| || || ||| || ||||| ||||| || ||||| |||| |||| Sbjct 119365 AGTGCACAGGTTGGA--GCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTG 119308 Query 81019 CAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCG 81078 || ||||||||| |||| | ||| | |||||||| ||| | || ||| |||||| Sbjct 119307 CAGTGATCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCG 119248 Query 81079 TCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCG 81138 | ||||| || | ||||||| |||||| || || || | | ||||| || Sbjct 119247 TACCAAAGCTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCG 119188 Query 81139 TAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCAC 81198 || | || |||| | |||||| | || | ||| | ||||||||||| |||||| Sbjct 119187 TACAGAGCCTCAAACTCGTCACCGTAACAGTCGGCGAGACCAGGGCACTCGTTGGGGCAC 119128 Query 81199 ATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGG 81258 || || ||| ||| || ||||| ||| |||||| ||| |||||||||||||| Sbjct 119127 ATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAGAGA 119068 Query 81259 GCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGA 81316 || ||||||||| || ||| || ||||||| | ||| ||||| || | || | Sbjct 119067 GCCAGGAACAGGTCACG--AGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAA 119010 Query 81317 GAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCG-ATCGAC-----CCCT 81370 | || || | || ||| || ||||| ||||| || || | ||| || || | || Sbjct 119009 GGAACTCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCT 118950 Query 81371 TGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGA 81430 || ||||||||||| ||| ||||| ||||| ||| |||||||||| ||| || | Sbjct 118949 TG---TTGCCACCCTGGTCGACATAACGAGCAGTGTTGTTGAATACACGCAGCATGGGAA 118893 Query 81431 TGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGC 81490 | || | || |||||| ||||| | || || || |||| || | | | Sbjct 118892 CCACGCCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGA-TTCGG 118834 Query 81491 TGA--TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGT 81548 ||| | ||| || || ||||| | | ||| |||||| ||||| || | ||| Sbjct 118833 TGAACGTTTAAG-CCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGT 118775 Query 81549 CTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTG 81608 || || || || || ||||| || | ||||| || | | ||| || |||| ||| Sbjct 118774 GTCGTAGATACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCATGAGGACAGCTG 118715 Query 81609 AGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGA 81668 ||| | ||||| ||||| ||||| |||| || ||| |||| | | | || Sbjct 118714 AGGCTGAGGGGTACCGGCGTTGAAAAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGA 118655 Query 81669 CATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTAC 81728 ||| |||| || || ||| ||| || ||||| ||||| || || | ||| || Sbjct 118654 CATGAGGTTGTATGTCTCCAAGACACGCTCGATATCATCACCCCAGATGCCAACAGCAAC 118595 Query 81729 ACGCATAAACATGTACTGGGG 81749 |||||||| ||||| ||| || Sbjct 118594 ACGCATAATCATGTGCTGAGG 118574 >seq81 Length=153540 Score = 190 bits (210), Expect = 2e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||||||||| |||||||| || ||||||||||| || || |||||||| |||||| Sbjct 143647 ATCATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCA 143706 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||||| || | ||| | ||| | || || ||||||||||| || |||||||| ||| Sbjct 143707 TCTGATACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGAC 143766 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| | ||||| || || ||||| |||||||| | ||||||||| | ||||| Sbjct 143767 CAGCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTCTCTGACTAC 143826 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||||||| || || ||||| || || || | || ||||| ||||| Sbjct 143827 AACATCCAAAAAGAGTCGACTCTCCACCTTGTGCTTCGCCTTCGTGGTGG 143876 Score = 181 bits (200), Expect = 1e-40 Identities = 171/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| ||||| |||||||| ||||| |||||||| |||||| ||||| || | Sbjct 143944 GTCAAGACCCTTACTGGCAAGACCATTACCCTTGAGGTCGAGTCATCTGATACTATCGAC 144003 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||| |||| || ||||||||||| || |||||||| ||||||||||| || || Sbjct 144004 AACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGCGACTTATC 144063 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || ||||||||||| || ||||||| || ||||| | ||||| || ||||||| || Sbjct 144064 TTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAAAAAGAG 144123 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 || ||||| || || || | |||||||| ||||| || Sbjct 144124 TCGACTCTCCACCTTGTGCTTCGTCTTCGTGGTGGTCA 144161 >seq126 Length=117423 Score = 170 bits (188), Expect = 2e-37 Identities = 178/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || || |||||||| || || || ||||| || || |||||||| ||||| Sbjct 30850 ATCATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 30909 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | ||||| || | ||| | || || |||||||||||||| ||||| || ||| Sbjct 30910 TCCGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 30969 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTA 27581 |||||||| || || |||||||||||||| |||||||||| || ||||| ||| ||||| Sbjct 30970 CAGCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTA 31028 Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| || ||||| || || ||| | || || || ||||| Sbjct 31029 CAACATCCAGAAGGAGTCTACTCTCCACCTGGTCCTCCGCCTCCGTGGTGG 31079 >seq82 Length=153091 Score = 141 bits (156), Expect = 1e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || || ||||| || || |||||||| || || || ||||| ||||| || | ||| Sbjct 10251 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 10310 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || || |||||||||||||| ||||| || ||||| ||||| | Sbjct 10311 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGATTG 10370 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || ||||| ||||| |||||||||| || ||||| | ||||| || |||| ||| Sbjct 10371 ATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAG 10430 Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || ||||| || || || | ||||| || ||||| Sbjct 10431 GAGTCTACTCTGCACCTTGTTCTCCGTCTCCGTGGTGG 10468 >seq18 Length=305043 Score = 116 bits (128), Expect = 4e-21 Identities = 196/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 32002 CAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCG 32061 |||||||||||||| ||||| ||| |||||| ||| | | |||| |||||| | Sbjct 165720 CAGCGCAAGGTGATCTACGCGTGCTTCAAGAGAAACATAATCAAAGACAAGAAGGTTGTT 165779 Query 32062 CAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAG 32121 | || | || || ||| | || |||||||| || |||||||| || ||| || || Sbjct 165780 GAATTGGCAGGTTATGTGTCCGAACAAACGGCATACCACCACGGTGAACAGTCACTTCAA 165839 Query 32122 GGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAG 32181 |||||| | |||||||||||||| | ||| |||| ||| | |||| || || Sbjct 165840 CAAACCATTATTGGTCTTGCTCAGAACTTCATTGGTTCAAACAACATCAACTGCCTGGAA 165899 Query 32182 CCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTAC 32241 || |||| | || || | || || || ||||| |||||||| || | ||||| Sbjct 165900 CCTAGTGGAAACTTCGGTTCTCGACTTGCAGGTGGTTCTGATGCTGCTAGTCCTCGTTAT 165959 Query 32242 ATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGACCC 32285 | |||||| || | |||||| | ||||| || ||| |||| Sbjct 165960 ACCTTCACTCGATTGTCACCTTTTGCCCGCAAAATCTTCCACCC 166003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570303549146320