Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq51 100 2e-16 >seq51 Length=202736 Score = 100 bits (110), Expect = 2e-16 Identities = 201/292 (69%), Gaps = 11/292 (4%) Strand=Plus/Minus Query 29758 ATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCAC 29817 ||| ||||| || |||| | | |||||||||||| || | | || | ||| ||||| Sbjct 137320 ATGGGGGTCATATCCCTTGACTGTGAAATCCTCTGCTTTCCATCCATCAATGCT-TCCAC 137262 Query 29818 CCTCCTGTT------TATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGT 29871 ||| | || | ||| | | |||||| || ||||| | ||| || ||| Sbjct 137261 CCTTTTCTTGGGCAATTTCCA-ACTCGGGGAAATT-TCGCGGCTCGCGCTCAAGTTGAAC 137204 Query 29872 CTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTG-GACAAACT 29930 ||| || | || |||| ||| ||||| || ||||| || |||| || | ||| || Sbjct 137203 CTTGAGGGCATCGACGTGATCGAGGTATACATGAGCATCACCCATAACATGTGTCAAGCT 137144 Query 29931 CTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGA 29990 ||| || | ||| | |||||| |||||||||| || || || | ||||||||| | Sbjct 137143 -TCCAGGGACCAGCTCACAGACGTGCGCCATCATGTGTGTTAGCAGCGCGTAGCTGGCAA 137085 Query 29991 TGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042 |||| ||||| || ||||| ||||| || | || | ||||||||||| || Sbjct 137084 TGTTGAAGGGAACGCCGAGACCCATATCGCAGGATCGTTGGTAGAGCTGGCA 137033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406305641216412