Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq51 96.9 3e-15 >seq51 Length=202736 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| |||||||| | || ||||| | || || || ||||||||||| || Sbjct 137032 CTGCCAGCTCTACCAACGATCCTGCGATATGGGTCTCGGCGTTCCCTTCAACATTGCCAG 137091 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 ||||| ||||| || ||||||| || || ||| | | |||| ||| || |||| | Sbjct 137092 CTACGCGCTGCTAACACACATGATGGCGCACGTCTGTGAGCTGGTCCCT-GGAAGCTTG- 137149 Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813 || | || |||| ||||| ||| | ||||| | ||| |||| ||| | | || Sbjct 137150 ACACATGTTATGGGTGATGCTCATGTATACCTCGATCACGTCGATGCCCTCAAGGTTCAA 137209 Query 34814 CTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATT 34852 || | || ||||| ||| |||||| || | ||||| Sbjct 137210 CTTGAGCGCGAGCCGCGAAATTTCCCCGAGTTGGAAATT 137248 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 6493 AATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGAT 6552 ||||| | || |||||| ||| ||||| || | || || | | ||| |||| Sbjct 137248 AATTTCCAACTCGGGGAAATTTCGCGGCTCGCGCTCAAGTTGAACCTTGAGGGCATCGAC 137189 Query 6553 GTGGTTCAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAAC 6610 ||| | ||||| | ||| ||||| |||| || | || | |||| || ||| |||| | Sbjct 137188 GTGATCGAGGTATACATGAGCATCACCCATAACATGTGT-CAAGCTTCC-AGGGACCAGC 137131 Query 6611 CCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACC 6670 | ||| || || ||||||| || ||||| ||||| || ||||||||||| || || Sbjct 137130 TCACAGACGTGCGCCATCATGTGTGTTAGCAGCGCGTAGCTGGCAATGTTGAAGGGAACG 137071 Query 6671 CCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 || | ||||| || | |||||||| |||||||||||| Sbjct 137070 CCGAGACCCATATCGCAGGATCGTTGGTAGAGCTGGCAG 137032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448257015247920