Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq81 176 1e-38 seq82 168 2e-36 seq126 167 5e-36 seq19 93.3 1e-13 >seq81 Length=153540 Score = 176 bits (194), Expect = 1e-38 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || |||||||| ||||| ||||||||||||||||| || || | ||||| Sbjct 144153 ACGAAGACGAAGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGAGAGGGT 144094 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || |||||||| || ||||||||||| || || ||||||||||||| || Sbjct 144093 GCGGCCATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCAGGAGGAATACC 144034 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||||||||||||| || ||||| ||||| || ||||| || ||||| || Sbjct 144033 TTCCTTGTCCTGGATCTTAGACTTGACGTTGTCGATAGTATCAGATGACTCGACCTCAAG 143974 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 || || ||||| || || || ||||| || Sbjct 143973 GGTAATGGTCTTGCCAGTAAGGGTCTTGAC 143944 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || |||||||| ||||| ||||||||||||||||| || || | ||||| Sbjct 143871 ACGAAGGCGAAGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCAGAGAGGGT 143812 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| ||||| || | || || ||||||||||||| || Sbjct 143811 ACGACCGTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCC 143752 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||||||||||||| || || || ||||| || ||||| || ||||| || Sbjct 143751 TTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCAGATGACTCGACCTCAAG 143692 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| ||||| || || | ||||| Sbjct 143691 GGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 143650 >seq82 Length=153091 Score = 168 bits (186), Expect = 2e-36 Identities = 159/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| ||||| ||||| || |||||||| || || | ||||| | ||||| Sbjct 10453 AGAACAAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCC 10394 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | || |||||||| || |||| || ||||||||| Sbjct 10393 TCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCC 10334 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| ||| || |||||||| ||||| ||| Sbjct 10333 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 10274 Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| || ||||| || || Sbjct 10273 TTGCCCGTCAGGGTCTTCACGAA 10251 >seq126 Length=117423 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||| ||||| || |||||||| || || ||||| | ||||| Sbjct 31064 AGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 31005 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || |||||||| || || ||||| || |||| || ||||||||| Sbjct 31004 TCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 30945 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || |||||||| || || ||||| || ||||||||| Sbjct 30944 TGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 30885 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| || || | |||||| Sbjct 30884 TTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 30853 >seq19 Length=300009 Score = 93.3 bits (102), Expect = 1e-13 Identities = 186/272 (68%), Gaps = 8/272 (3%) Strand=Plus/Minus Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGC 178144 |||| |||||||||||||||||| | |||| | ||| ||||| |||||||| Sbjct 119337 CCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCA---GTGATCCTTGTAGAGCATGAAGGGG 119281 Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204 |||| ||| | || ||| |||||||| | |||||||| ||| || || || | Sbjct 119280 TTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGCTTCTGAGCCTTGATAGAC 119221 Query 178205 TTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAG 178264 || | || || || |||||||||| | ||| || |||| || || || || Sbjct 119220 TTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAGAGCCTCAAACTCGTCACCGTA- 119162 Query 178265 ACA-TCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTT 178323 ||| || ||||||| || ||| |||||||| | ||| |||| | |||| | || Sbjct 119161 ACAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCGCCGTTCTTCTC 119102 Query 178324 CACTCGTTTCATGAAGAGGTCAGAGGTCCAGA 178355 || || ||||| || || |||| | |||||| Sbjct 119101 GACACGCTTCATAAAAAGATCAGGGATCCAGA 119070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159137727578765