Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq19 149 9e-31 >seq19 Length=300009 Score = 149 bits (164), Expect = 9e-31 Identities = 558/860 (65%), Gaps = 30/860 (3%) Strand=Plus/Minus Query 77685 GATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCA---TATTGTATTATCTCGGTA 77741 || || ||||| ||||| || ||||||| || | ||| || | || ||||| || Sbjct 119418 GACGCAAGATTGCAAACAGCGACCTCATCAGGG---GCACAGTACTCAATGATCTCAGTG 119362 Query 77742 CATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCA-TGA 77800 || || || | | ||| || || || || | |||||||||||| ||||| ||| Sbjct 119361 CACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGA 119302 Query 77801 GTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCA 77860 ||||| || || || || || | ||||| || |||| | |||| ||| | | ||| Sbjct 119301 -TCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCA 119243 Query 77861 GACGACTCT-AGCTTTTATCATAGATTTGTATCGCCT---CTCTCTTTCATATTGA--GT 77914 | | ||| ||| || || ||| ||| | | | |||||| || || | || Sbjct 119242 AA-GCTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGT 119187 Query 77915 ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCA 77974 | | |||| ||||| || || || || || | | |||||||| || || ||||| Sbjct 119186 ACAGAGCC--TCAAACTCGTCACCGTAACAGTCGGCGAGACCAGGGCACTCGTTGGGGCA 119129 Query 77975 CATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAG 78034 ||| | | ||| || || | | || || || |||||||| |||||||| ||||| || Sbjct 119128 CATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAGAG 119069 Query 78035 AGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAG 78094 ||| | || || || || | || || || || || |||||| ||||| || Sbjct 119068 AGCCAGGAACAGGTCACGAGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAG 119009 Query 78095 AAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTT 78154 ||||| | | || | ||||| || || || || || || | | |||||||| || Sbjct 119008 GAACTCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTT 118949 Query 78155 ATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 78214 || || ||||| || | ||| | || ||||| || | || | || ||| |||| | Sbjct 118948 GTTGCCACCCTGGTCGACATAACGAGCAGTGTTGTTGAATACACGCAGCATGGGAACCAC 118889 Query 78215 ACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAAT 78274 ||||| || || || || || || | ||| ||| ||| | || || || || Sbjct 118888 GCCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATTCGGTGAAC 118829 Query 78275 GGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTA 78334 | || || || || || |||||||| || || | || ||| || | || ||||| Sbjct 118828 GTTTAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTA 118769 Query 78335 GATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATG 78394 |||||| || || ||||| ||| |||| | | ||| || || |||| ||| | || Sbjct 118768 GATACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCATGAGGACAGCTGAGGCTG 118709 Query 78395 AACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAG 78454 | || || || || || | ||| || || ||||| || || | || || | || Sbjct 118708 AGGGGTACCGGCGTTGAAAAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGACATGAG 118649 Query 78455 ATTGTATGT-TTCAATA---GCT-GATTCTATGTCCCATTGATGAATTCCTACCGCTACA 78509 |||||||| | ||| | ||| ||| || ||| |||| || || || ||| Sbjct 118648 GTTGTATGTCTCCAAGACACGCTCGATATCATCACCC-CAGATG----CCAACAGCAACA 118594 Query 78510 CGCATCAACATATGCTGAGG 78529 ||||| | ||| |||||||| Sbjct 118593 CGCATAATCATGTGCTGAGG 118574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694660455291040