Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq19 176 6e-39 seq17 129 8e-25 >seq19 Length=300009 Score = 176 bits (194), Expect = 6e-39 Identities = 585/898 (65%), Gaps = 28/898 (3%) Strand=Plus/Minus Query 76280 GATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCA---TATTGTATTATCTCCGTG 76336 || || ||||| ||||| || ||||||| || |||| || | || ||||| ||| Sbjct 119418 GACGCAAGATTGCAAACAGCGACCTCATCAGG---GGCACAGTACTCAATGATCTCAGTG 119362 Query 76337 CATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACA-TGA 76395 || || || | ||| || ||||| || | |||||||||||| ||| || ||| Sbjct 119361 CACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGA 119302 Query 76396 GTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCA 76455 ||||| || || | || || |||| || || |||| | |||| ||| | | ||| Sbjct 119301 -TCCTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCA 119243 Query 76456 GACGACTCT-AGCTTTTATTATAGATTTGTATCGCTT---CTCTCTTTCATA-TTGT-GT 76509 | | ||| ||| || || ||| ||| | ||| |||||| || || || | || Sbjct 119242 AA-GCTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGT 119187 Query 76510 ATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACA 76569 | | | || ||||| || || || || || | | |||||| || || || || || Sbjct 119186 ACAGAGCC--TCAAACTCGTCACCGTAACAGTCGGCGAGACCAGGGCACTCGTTGGGGCA 119129 Query 76570 CATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAG 76629 ||| | | ||| || || | | || || || |||||||| |||||||| ||||| || Sbjct 119128 CATAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAGAG 119069 Query 76630 AGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAG 76689 ||| | || || || || | || || || || || |||||| ||||| || Sbjct 119068 AGCCAGGAACAGGTCACGAGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAG 119009 Query 76690 GAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTT 76749 |||||| | | || | ||||| || || || || || || | |||| ||||| || Sbjct 119008 GAACTCAAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTT 118949 Query 76750 ATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAAT 76809 || || ||||| || | ||| | |||||||| || | || | || ||| |||| | Sbjct 118948 GTTGCCACCCTGGTCGACATAACGAGCAGTGTTGTTGAATACACGCAGCATGGGAACCAC 118889 Query 76810 GCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAAT 76869 |||||| || ||||| || || || | ||| ||| ||| ||||| || || Sbjct 118888 GCCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATTCGGTGAAC 118829 Query 76870 AGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATA 76929 || ||| || || || ||||| || || || | ||||| || | ||||| || Sbjct 118828 GTTTAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTGTCGTA 118769 Query 76930 GATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATG 76989 ||| || || || || || ||| |||| | | ||| || || |||| ||| | || Sbjct 118768 GATACCGTCAATGCTGTCCTCCTTCATATCGACAAGGAAGCATGAGGACAGCTGAGGCTG 118709 Query 76990 AACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAG 77049 | || || || || || | ||| || || ||||||||||| | || || | || Sbjct 118708 AGGGGTACCGGCGTTGAAAAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGACATGAG 118649 Query 77050 ATTGTATGTTTCAATAACTGCTTCTATATC----CCATTGATGAATTCCTACAGCGACAC 77105 |||||||| || | || || ||||| || |||| || ||||| |||| Sbjct 118648 GTTGTATGTCTCCAAGACACGCTCGATATCATCACCCCAGATG----CCAACAGCAACAC 118593 Query 77106 GCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGA 77163 |||| | ||| |||||||| || || || | || || || ||||| || || || Sbjct 118592 GCATAATCATGTGCTGAGGACGCTCAGCAATTTTGCCATCAATATTCAATAAATAGGA 118535 >seq17 Length=315547 Score = 129 bits (142), Expect = 8e-25 Identities = 557/870 (64%), Gaps = 28/870 (3%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| || | || || ||||||||||| || || ||||| | | || || || Sbjct 168909 TTTTGGTAGTCGGCAACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCAAGAGAGATGTTC 168968 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || || || || || || | || || | || | | || | | | | Sbjct 168969 TCCATGAAGTCGAAGGGGTTTGTGGCCTTGTACACCTTCTCATTACCGAGAGCAACGAGC 169028 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 || | ||| || ||||| || || ||| ||||| | | | ||||| |||| || Sbjct 169029 AGACGATCAGCCACGAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCTAGAAG- 169087 Query 46519 TTGACC----GGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATAT 46574 ||| || |||||||| ||||| ||||| || || || || || ||||| | || Sbjct 169088 ---ACCACAAGGGAGAGCCTCGGTAAGGAACTCCTGCTCGATGGTAACGGCATCGGTGAT 169144 Query 46575 TATCGATGTTACTGTTTCCTCA-CTTGGTGG-ATGCATCAAATGTTTAAAC---ATTAAA 46629 ||||| ||| || || |||| ||| | | | | | | | | | | | Sbjct 169145 ----GATGTC-CTGGATCATCTGCTTGCTGGCACGTCCCTTAAGGTGAGAGTGGAGGAGA 169199 Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689 || |||||||| ||||| || ||||| | || | ||||| || || || || Sbjct 169200 CAGGCAAAATCGGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAGA 169259 Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAAT 46749 |||||||| || |||||||| |||||||| || || | || || | || ||||| Sbjct 169260 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAG 169319 Query 46750 ATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GA 46806 || || || ||||| || || || ||||| | | | | || || || | | Sbjct 169320 ATACCCTCAACAGCAGCAAAGGCAACAAGACGTTGAGCAAATGAGGAGTCCTTGTCCTGG 169379 Query 46807 ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTA 46866 ||||| | ||||| |||||||| || | ||||| || || || | || || Sbjct 169380 ATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTTG 169439 Query 46867 AAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATT 46926 ||||| | || ||| || || || | || ||||| || | || || | Sbjct 169440 AAGAGGTATGTTCTTTGGGCAGGCTCCTTGATGTAGGTATCAATGAGCAGGGAGTATGTC 169499 Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986 || || || ||||| || || ||||| || ||||| || |||| || || | ||| Sbjct 169500 TCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGATC 169559 Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAA-TTCTCATTCACTATTCCATCACTAGCAGC 47045 || ||||| | ||||| ||| |||| ||||| || || || ||||| ||||| Sbjct 169560 TGGACCTCGCCGCTGAATCGCTCA-ACAAGGTTCTCGTTGACGATACCATCGGAGGCAGC 169618 Query 47046 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCCA 47102 || || || | | || || || | | ||||| ||||||| | || ||||| Sbjct 169619 GAAGAAAGCAAGAATGTGGGAGATGAAGAACTGCTCATCTGTAGTCAAACGGTTGTTCCA 169678 Query 47103 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTT 47162 ||| | || ||| || || | ||| | || || ||||||||||| || |||||||| || Sbjct 169679 GTCGTGGAGATCCTTGGAAAGATCAATCTCCTCGGCTGTCCAGAAGGAGGCCTCTGCCTT 169738 Query 47163 TTTATACATATTCC--ATATATCACGATAT 47190 || ||||| | || || ||||| || || Sbjct 169739 CTTGTACATTTGCCAGATCTATCAGGAAAT 169768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712925835875520