Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq126 120 7e-22 seq82 113 1e-19 seq81 107 4e-18 seq19 89.7 1e-12 >seq126 Length=117423 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || ||||||||||| || ||||||||||| ||| | || | Sbjct 31071 GAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCG 31012 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || || |||||||| | ||||||||||| | || || || Sbjct 31011 GCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTC 30952 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | | |||| ||| ||| || ||||| || Sbjct 30951 CTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGT 30892 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||| ||||| ||||| | |||||| Sbjct 30891 GATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 30853 >seq82 Length=153091 Score = 113 bits (124), Expect = 1e-19 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| ||||| || ||||||||||| || ||||||||||| |||| | |||| Sbjct 10460 GAGACGGAGAACAAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCG 10401 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || |||||||| | | ||| ||||||| | || || || Sbjct 10400 GCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGGGGAATGCCCTC 10341 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || |||||| | || | | |||| || ||| || || || || Sbjct 10340 CTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGT 10281 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095 || || |||||||| || ||||||||||| Sbjct 10280 GATGGTCTTGCCCGTCAGGGTCTTCACGAA 10251 >seq81 Length=153540 Score = 107 bits (118), Expect = 4e-18 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| || ||||| |||||||||||||||||||| |||| | || | ||||| Sbjct 144143 AGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 144084 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || ||||||||||| | ||||||||| | | || |||||||| || Sbjct 144083 TCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCAGGAGGAATACCTTCCTTGTCC 144024 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | | || || ||| || ||||| ||||| || Sbjct 144023 TGGATCTTAGACTTGACGTTGTCGATAGTATCAGATGACTCGACCTCAAGGGTAATGGTC 143964 Query 152073 TTGCCCGTGAGAGTCTTCACGA 152094 ||||| || || ||||| |||| Sbjct 143963 TTGCCAGTAAGGGTCTTGACGA 143942 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| || ||||| |||||||||||||||||||| || | | || | || || Sbjct 143861 AGCACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCAGAGAGGGTACGACCGTCC 143802 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || |||||||| || | | ||||||||| | | || |||||||| || Sbjct 143801 TCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 143742 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| | || | | || || ||| || ||||| || || || Sbjct 143741 TGGATCTTGGACTTGACATTGTCGATAGTATCAGATGACTCGACCTCAAGGGTGATGGTC 143682 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||||| ||||| Sbjct 143681 TTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 143650 >seq19 Length=300009 Score = 89.7 bits (98), Expect = 1e-12 Identities = 183/265 (69%), Gaps = 8/265 (3%) Strand=Plus/Plus Query 115648 CTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGGAGCCTCTTTTGT--CCCAA 115705 ||||||||||||||||||| ||| || ||||| |||| ||||| ||| ||||| Sbjct 119079 CTGATCTTTTTATGAAGCGTGTCGAGAAGAACGGCGAATGGA--CTCTTATGTGCCCCAA 119136 Query 115706 TGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGAGAATCTTTACGAAAGGTA 115765 || ||||||||| | || ||| ||| ||||||||| ||| ||||| | ||| Sbjct 119137 CGAGTGCCCTGGTCTCGCCGACTGTTACGGTGACGAGTTTGAGGCTCTGTACGAGAAGTA 119196 Query 115766 CGAGAAAGAGGG-AAGAGCCAAAAGGGTTGTGAAGGCGCAAGACCTTTGGCATCATATCC 115824 ||||| |||||| ||| | | || | | | ||||| || | |||||| | || | Sbjct 119197 CGAGAGAGAGGGTAAGGGTCGCAA-GTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTC 119255 Query 115825 TTGTCACACAGTCAGAGGTCGGAATGCCCTTTATTGCGTACAAAGATGCAGT-TTGTCGA 115883 | | | ||| ||||| ||||| ||||| || ||||| ||| || | || Sbjct 119256 TCGAGGCCCAGACAGAGACCGGAAACCCCTTCATGCTCTACAAGGAT-CACTGCAACCGC 119314 Query 115884 AAGAGCAATCAAAAGAATTTCGGTA 115908 |||||||| |||||||| | |||| Sbjct 119315 AAGAGCAACCAAAAGAACCTTGGTA 119339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153806593220831