Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sambucinum_20[genbank_20GCA_5F001567575.1_202016-02-24] 961 sequences; 37,784,234 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq126 132 3e-26 seq81 132 3e-26 seq82 111 1e-19 >seq126 Length=117423 Score = 132 bits (146), Expect = 3e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || |||||| ||||||||||| ||| || ||| | || || Sbjct 31061 ACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 31002 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | |||||||| || | || | || ||||| ||| Sbjct 31001 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 30942 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| || |||||||| | || |||||||| Sbjct 30941 ATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 30882 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 |||||||||||||| ||||| || ||||||||| Sbjct 30881 CCCGTGAGGGTCTTGACGAAAATCTGCATGATG 30849 >seq81 Length=153540 Score = 132 bits (146), Expect = 3e-26 Identities = 160/216 (74%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || ||| |||||||||||||| || | ||| || |||| || Sbjct 143859 CACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCAGAGAGGGTACGACCGTCCTC 143800 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| || ||||| |||||||| || | ||| | |||||||| ||| Sbjct 143799 GAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTG 143740 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | || || || | || || ||||| | || || ||| Sbjct 143739 GATCTTGGACTTGACATTGT--CGATAGTATCAGATGACTCGACCTCAAGGGTGATGGTC 143682 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || ||||||||||| |||||||||||||||||| Sbjct 143681 TTGCCGGTGAGGGTCTTGACGAAGATTTGCATGATG 143646 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || ||| |||||||||||||| |||| ||| ||| | || || Sbjct 144141 CACAAGGTGGAGAGTCGACTCTTTTTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTC 144082 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || ||||| | |||||||| || | ||| | ||||||||| ||| Sbjct 144081 AAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCAGGAGGAATACCTTCCTTGTCCTG 144022 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | || || || | || || ||||| | ||||| ||||| Sbjct 144021 GATCTTAGACTTGACGTTGTCGATAGTATCAGATGACTCGACCTCAAGGGTAATGGTCTT 143962 Query 44308 TCCCGTGAGGGTCTTCACGA 44327 || || |||||||| |||| Sbjct 143961 GCCAGTAAGGGTCTTGACGA 143942 >seq82 Length=153091 Score = 111 bits (122), Expect = 1e-19 Identities = 147/202 (73%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| ||||||||||| |||| ||| || | || || Sbjct 10450 ACAAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCG 10391 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || |||||||| ||||| || || | || | || ||||| ||| Sbjct 10390 AGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 10331 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||| | ||| || ||||| | || || |||| Sbjct 10330 ATCTTGGACTTGACATTGT--CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCT 10273 Query 44307 TTCCCGTGAGGGTCTTCACGAA 44328 | ||||| |||||||||||||| Sbjct 10272 TGCCCGTCAGGGTCTTCACGAA 10251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359986183724937