Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F001931975.2_202017-02-15] 876 sequences; 51,318,644 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq859 136 8e-27 seq746 86.0 1e-11 >seq859 Length=812484 Score = 136 bits (150), Expect = 8e-27 Identities = 179/248 (72%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 |||||||| || || || | || |||||||| | ||| ||| |||| ||| | Sbjct 626182 ATCATTACTGATGCCGTCACCATTGAGCAGGAGTTCCTCACTGAGGCTCTTCCTTGTGCC 626241 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 ||| | ||||||||| |||| || ||| |||||||| || ||||| || || || | Sbjct 626242 CTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTC 626301 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 |||| || ||||| ||||||| || ||||| | | |||||||| | || |||||| Sbjct 626302 CTTGTCGCGCTTGGCAACGAGAAGGTTTACAAGGCCACCAACCCCTTCGACTTCATGGAG 626361 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || ||| || ||||||||||||||||| |||||||| ||||| |||| | Sbjct 626362 AACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTACCAGAAG 626421 Query 230626 CCTGGTGT 230633 | ||||| Sbjct 626422 GCCGGTGT 626429 >seq746 Length=2546576 Score = 86.0 bits (94), Expect = 1e-11 Identities = 171/251 (68%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 319781 AGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTT 319840 |||||||| | | | | | || ||||| ||| || ||||| || ||| | |||| | Sbjct 915233 AGTCAATGGTGGTCATCTCAGTATCGGCGGAGTCAAGGTCGTGCTCGACGAAGACAGTCT 915174 Query 319841 TCAAAACA-TCCGCAGAGGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGG 319899 | | | || || |||| |||||| ||| ||| |||| || |||||||| ||| Sbjct 915173 TGACCTCGCTCTGCTTAGGGAAACCCT-CAACCTGCTCGTTGTTGATGGCGCGCATGAGG 915115 Query 319900 GTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTG 319959 || || || || | ||||| || || || |||||||| || | || || || || | Sbjct 915114 GTGGACTTTCCGGAACCGTTGGGACCGCAAAGACCGTAACGCTGACCACGCTTGAGACGG 915055 Query 319960 AACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACAC 320019 | | || | ||| |||||||| || |||| || || ||||| || ||| | || Sbjct 915054 AGGTGAGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAA 914995 Query 320020 AGATCCTCACC 320030 ||||||||||| Sbjct 914994 AGATCCTCACC 914984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057812127247880