Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F001931975.2_202017-02-15] 876 sequences; 51,318,644 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq13 190 3e-43 seq859 107 3e-18 >seq13 Length=1543628 Score = 190 bits (210), Expect = 3e-43 Identities = 594/907 (65%), Gaps = 22/907 (2%) Strand=Plus/Plus Query 71749 ATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTT 71808 |||||||||||||| || || | |||||| || | || | ||| || ||||| Sbjct 383698 ATAATTTCAGTGCACAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTG 383757 Query 71809 TTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATA 71868 ||| || |||||||| || || || || || | || || ||| |||| | || | | Sbjct 383758 CGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGA 383817 Query 71869 ATCGCTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTT---TTCTCTTTC 71924 || || | ||| | | || |||||| | ||| ||||| | ||| || | || Sbjct 383818 ATGGCGTACCA-AAGTTTCTGAGCCT---TGATAGTCTTGCGACCCTTGCCCTCCTTCTC 383873 Query 71925 GTA--TTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCA-TTGTCTAATCCAGGACA 71981 ||| || ||| | | | |||||||| ||| || |||| | | | | ||||| || Sbjct 383874 GTACTTTTCGTACAGAGCC--TCGAACTCCTCT-CCGTAGCAGTCGGCGAGGCCAGGGCA 383930 Query 71982 TTCATTCGGACACATCAATGACCACTCTCCATCATCATTT--ACTCGTTTCATAAAGAGA 72039 || || || ||||||| | ||| || || | || ||| || || ||||| || ||| Sbjct 383931 CTCGTTGGGGCACATCAGCGTCCAGTCGCCGT--TCTTTTCAACACGCTTCATGAAAAGA 383988 Query 72040 TCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTC 72099 ||||| |||||||| || | || || || | || | |||||| || || ||| Sbjct 383989 TCAGGGATCCAAAGGGCGAGGAAAAGGTCACGGGCACGGACCTCCTCTTTACCGTGGTTC 384048 Query 72100 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 72159 || ||||| |||||| | | | |||||| ||||| || || | ||| ||||| | | Sbjct 384049 TTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAA 384108 Query 72160 ACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 72219 | || || || ||||| || ||||| || | || | ||| ||||| || | || | Sbjct 384109 GCACCGGGTCGCTTGTTGCCACCCTGGTCGACATAGCGAGCAGTGTTGTTGAAGACACGA 384168 Query 72220 AACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCA 72279 | ||| |||| || ||| || |||| ||| ||||| |||| ||| ||| ||| | ||| Sbjct 384169 AGCATAGGAACAACACCGTTCGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCA 384228 Query 72280 CGAATA--TTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 72337 || ||| ||| || ||||| || || || ||||| || ||||| | || || Sbjct 384229 CGGATACGGTGCACGTT--CAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGG 384286 Query 72338 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 72397 || | ||||| ||||| ||||| ||||| || ||| |||| | || | || || Sbjct 384287 TCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAG 384346 Query 72398 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 72457 |||| |||| | || || || || || || | || ||||| || || || || Sbjct 384347 ATGACAATTGGGGCTGAGGGGTGCCGGCGTTGAAGAGCGTGGGAGAGGCATGTGTGAAGA 384406 Query 72458 ATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTC 72517 |||| |||| || ||||| ||||| | || || ||||| || | Sbjct 384407 ATTTGCTGGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAAATAC 384466 Query 72518 CTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCA 72577 | || | |||||||| | ||| |||||||| | || || ||||| | || || | Sbjct 384467 CAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCTTGA 384526 Query 72578 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 72637 | ||| ||| |||||||| || || ||||| || | |||| || || || || | Sbjct 384527 GGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCAT 384586 Query 72638 AAATAAT 72644 | | ||| Sbjct 384587 AGACAAT 384593 >seq859 Length=812484 Score = 107 bits (118), Expect = 3e-18 Identities = 548/863 (63%), Gaps = 22/863 (3%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 || ||||| || | ||||| || ||||| || || ||||| || | | || || || Sbjct 626420 TTCTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTC 626361 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGA-AAT 41892 |||||||| || || || ||||| | || |||| || | | |||| || || Sbjct 626360 TCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAAACCTTCTCGT-TGCCAAGCGCGACAAG 626302 Query 41893 CAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 41952 | | ||| |||| ||| || || || ||||| | ||| | ||||| || | ||| Sbjct 626301 GAGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAG 626242 Query 41953 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 | ||||||||| |||| || || || || ||||| | ||| || || || || || Sbjct 626241 GGCACAAGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTAATGAT 626182 Query 42013 AGATCTTACTGTTTCTTCA-CTCGGTGGAT--ACAATAAATGTTTAAAC--ATCAAACAT 42067 | | ||| || || || | ||| || | | || | | | || Sbjct 626181 A-----TCCTGGATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGGCAG 626127 Query 42068 GCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 42127 || || || ||| ||||||||||| | | || | |||||||| || || || ||| Sbjct 626126 GCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCG 626067 Query 42128 GGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATT 42187 ||||| || |||||||| || ||||| || ||||| || || | ||| |||||||| Sbjct 626066 GGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATA 626007 Query 42188 CCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATC 42244 || || || || || || |||| || | || || | || | | || || ||| Sbjct 626006 CCCTCAACAGCAGCGAAAGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTATCCTGGATC 625947 Query 42245 CA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 42303 || | || ||||| |||||||||||| | || || || || || ||||| ||||| Sbjct 625946 CATCGGATG-GCCCAGTCGGCCTTCTTTCGGATGCAGGGGATGGTCTCAATGGCGTTAAA 625888 Query 42304 GAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTC 42363 ||| ||| || | | || || | || || || || | || || | || Sbjct 625887 GAGGTAGGTTCGCTGAGCGGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTC 625828 Query 42364 TGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTG 42423 || || ||||| || || ||||| || |||||||| || | ||||||| | ||| Sbjct 625827 GGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTG 625768 Query 42424 TACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAA 42483 || || || ||||| || | | || ||||| || || || ||| || || || Sbjct 625767 GACCTCGCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGACGCAGCGAA 625708 Query 42484 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTA---ATTTATTCCAATC 42540 || || | | || | || | | || || | || | || ||||| || Sbjct 625707 GAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTC 625648 Query 42541 ATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTT 42600 || || ||| || || | ||| | || || | ||||| || || || || ||||| || Sbjct 625647 ATGGAGATCCTTGGAAAGATCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCCTTCTT 625588 Query 42601 ATACATATTCCAGA--TATCATG 42621 ||||| | ||| | ||||||| Sbjct 625587 GTACATTTGCCAAATCTATCATG 625565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671131851025760