Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F001931975.2_202017-02-15] 876 sequences; 51,318,644 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq859 241 2e-58 seq13 145 1e-29 >seq859 Length=812484 Score = 241 bits (266), Expect = 2e-58 Identities = 566/843 (67%), Gaps = 21/843 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| |||||||||| |||||| |||| ||||| ||||| | || ||| | ||||| Sbjct 625573 ATTTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATTGATCTT 625632 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || | || ||| | | || |||||| ||||| || | || Sbjct 625633 TCCAAGGATCTCCATGACTGGAACAACCGCCTGACTGCCGATGAGCAGTTCTTCGTCTCT 625692 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||||| | || ||||| || | || ||||| || |||||||| || || || || || Sbjct 625693 CACATCCTTGCTTTCTTCGCTGCGTCTGATGGTATTGTCAACGAGAACCTCGTCGAG-CG 625751 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT-GCTTTTACGGATTCCAAATCATGA 125256 |||| | ||| | || || |||| |||| |||| ||||| ||||| ||||||| Sbjct 625752 ATTCAGTGGCGAGGTCCAGATCCCCGAGGC-TCGTTGCTTCTACGGCTTCCAGATCATGA 625810 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-G 125315 | |||||| | ||||| || | ||||| || ||||||| ||||| || || | Sbjct 625811 TGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGACACCTACATCAAGGAGCCCG 625870 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 | | ||| | ||||||||||| || || || | || | || || || ||||| Sbjct 625871 CTCAGCGAACCTAC-CTCTTTAACGCCATTGAGACCATCCCCTGCATCCGAAAGAAGGCC 625929 Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435 | |||| || || |||||| | || | | || || | ||| | | || || || Sbjct 625930 GACTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCCTTTGCCCAGCGTCTCGTTGCT 625989 Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495 ||||| || || ||||| |||||||| ||| || || | ||||| ||||||||| Sbjct 625990 TTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAG 626049 Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555 ||||| || ||||||||||| ||||| | |||||| | || ||||| || ||||| Sbjct 626050 AAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGT 626109 Query 125556 CTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCC 125615 || ||| |||||||||| || || | ||| | | | | || | | || Sbjct 626110 CTTCACACTGACTTTGCCTGCCTCCT------CCACTCT---CACCTCAAGGGTCGTGCC 626160 Query 125616 AGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTA 125675 ||| | | | | || | || | || |||||||| | || || || ||||| || Sbjct 626161 AGCAAGCAGATGATCCAGGATATCATTACTGATGCCGTCACCATTGAGCAGGAGTTCCTC 626220 Query 125676 ACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATA 125735 || || | || || | | | |||||||||| | || ||| ||||||| Sbjct 626221 ACTGAGGCTCTTCCTTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTACATT 626280 Query 125736 GAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACAACGCC 125792 ||||| || || |||||||| || || | ||||| || ||| ||||||| ||| Sbjct 626281 GAGTTCGTCGCTGATCGTCTCCTTGTCG---CGCTTGGCAACGAGAAGGTTTACAAGGCC 626337 Query 125793 AAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAG 125852 | || ||||| || |||||| | ||| || || | || ||||||||||| |||||| Sbjct 626338 ACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAG 626397 Query 125853 AAG 125855 ||| Sbjct 626398 AAG 626400 >seq13 Length=1543628 Score = 145 bits (160), Expect = 1e-29 Identities = 303/446 (68%), Gaps = 4/446 (1%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || ||| | ||| ||||| | || ||||||||| | || Sbjct 384134 CAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCTGAT 384075 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || | || | || || ||| || || |||| || ||| | ||| Sbjct 384074 GTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGGTCCGTGCCCGTGAC 384015 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 | || || || ||| | || ||| | ||||||||||| || | | ||| || Sbjct 384014 CTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAAGAACGGCGAC 383955 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| || ||||||||| || || || || || |||| |||| || || ||||| Sbjct 383954 TGGACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGAGAGGAGTTC 383895 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC-GATACGTGAGACGAGTCGATGCACG 97174 ||||| |||| |||||| | |||||| | || |||| | || | || | Sbjct 383894 GAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAAGACTA-TCAAGGCTCA 383836 Query 97175 AGAACTGTGGAAGGCCAT-CGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233 |||| ||| | ||||| | ||| ||| ||| ||||| |||| || | ||| |||| Sbjct 383835 GAAACTTTGGTACGCCATTCTTGA-GGCCCAGACTGAGACCGGAAACCCATTCATGCTCT 383777 Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293 |||||||| || || ||||| ||||||||| || | || |||||| |||||| Sbjct 383776 ACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCATCCGAAGCTCCA 383717 Query 97294 ATCTGTGCACGGAAATTGTAGAGTAC 97319 | |||||||| |||||| | |||||| Sbjct 383716 ACCTGTGCACTGAAATTATTGAGTAC 383691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741051085401760