Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F001931975.2_202017-02-15] 876 sequences; 51,318,644 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq746 105 1e-18 seq861 104 4e-18 >seq746 Length=2546576 Score = 105 bits (116), Expect = 1e-18 Identities = 86/102 (84%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| || | ||||| | |||||||||||||| || ||||||||||| || | Sbjct 1291723 CGCCAAGCGTCACCGAAAGATCT-TGCGAGATAACATCCAGGGTATCACCAAGCCCGCCA 1291665 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 |||| ||||| ||||| || ||||| ||||||||| |||||| Sbjct 1291664 TCCGACGTCTCGCTCGCCGAGGTGGTGTCAAGCGTATCTCTG 1291623 Score = 98.7 bits (108), Expect = 2e-16 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| || | ||| |||||| ||||||| || ||| |||| ||| | Sbjct 1291566 TGATCTACGAGGAGACCCGCGGTGTCCTGAAGACCTTCCTCGAGGGCGTCATCCGTGACG 1291507 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||||||||| || | ||| | ||||| | Sbjct 1291506 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACTGTCACATCTCTTGATGTTGTCTACG 1291447 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 | |||| || |||||||| | | || ||||| || ||||| || Sbjct 1291446 CCCTGAAGCGACAAGGCCGCACCCTCTACGGTTTCGGTGGTTAAGCT 1291400 >seq861 Length=1422081 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| | | ||||| ||||| ||||||||||||||||| ||||| Sbjct 1397122 GCCAAGCGTCACCGAAAGATTT-TGCGAGACAACATTCAAGGAATCACCAAGCCCGCTAT 1397180 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| ||||||||||| || ||||||||| | |||| Sbjct 1397181 CCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATTTCTG 1397221 Score = 93.3 bits (102), Expect = 7e-15 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| |||| |||| | |||| ||||||| || || |||| || | Sbjct 1397283 TGATCTACGAGGAGACCCGTGGTGTTCTTAAGACCTTCCTCGAGGGTGTCATCCGCGACG 1397342 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 || || ||| || |||||||| || || ||||||||||||||| | || | ||||| | Sbjct 1397343 CTGTCACCTACACTGAGCACGCCAAGCGCAAGACTGTCACCTCCCTCGACGTAGTCTACG 1397402 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | || || || || |||| | |||||||| || ||||| Sbjct 1397403 CTCTCAAGCGCCAGGGACGTACCCTCTATGGTTTCGGTGGTTAA 1397446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074399067068