Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F001931975.2_202017-02-15] 876 sequences; 51,318,644 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq437 170 4e-37 seq426 158 2e-33 seq146 147 4e-30 seq799 111 3e-19 seq746 98.7 2e-15 seq816 86.0 1e-11 >seq437 Length=608608 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || |||||||| || |||||||| || ||| Sbjct 261036 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 260977 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || ||||||| || ||||| || || Sbjct 260976 AGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGG 260917 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 260916 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 260857 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || |||||||||||||||||||| |||||||| Sbjct 260856 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 260810 >seq426 Length=1359975 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || || || || || || ||||| || ||||| Sbjct 505826 CCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAA 505767 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||||| || ||||| ||||||| ||||| ||||| ||| Sbjct 505766 AGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGAGGA 505707 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||| || || ||||| || | ||| || ||| Sbjct 505706 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACT 505647 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || ||||| ||||| ||||||||||||||||| || ||||| Sbjct 505646 TCCAGAGTAATGGTCTTTCCAGTGAGGGTCTTGACGAAGATTTGCAT 505600 Score = 156 bits (172), Expect = 8e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | || || || ||||| || || ||||| ||||| ||| Sbjct 505316 CCACCACGGAGGCGGAGAACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAG 505257 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || | | ||| ||||| || ||| Sbjct 505256 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCAGGGGGA 505197 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | |||||| ||||| ||||| | || || || Sbjct 505196 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCGGAGGACTCAACC 505137 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | ||||||||| || || || | |||||||||||| |||||||| ||| Sbjct 505136 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATGATG 505086 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | || | ||| || || ||||| || |||||||| || ||| Sbjct 506054 CCACCGCGAAGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTC 505995 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| |||||||| || ||||| || || | || || || || ||| Sbjct 505994 AAGGTGCGGCCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGA 505935 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| ||| ||| || || ||||| || || || Sbjct 505934 ATACCCTCCTTGTCTTGAATCTTGCTCTTCACGTTGTCAATAGTGTCACTGGACTCGACC 505875 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| ||||| ||||| ||||| || || |||||||| Sbjct 505874 TCAAGGGTGATGGTCTTTCCGGTGAGTGTCTTCACAAAAATCTGCAT 505828 Score = 111 bits (122), Expect = 3e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | || || || || || || || ||||| || |||| Sbjct 505598 CCACCACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCA 505539 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | ||||| || || || || || | || ||||| || || Sbjct 505538 AGGGTTCGGCCGTCTTCGAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGG 505479 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||||| ||| || |||||||| || | || || || Sbjct 505478 ATACCCTCCTTATCCTGAATCTTTGACTTAACATTGTCGATGGTATCGGACGACTCGACC 505419 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455 || | |||||||| || || |||||||||||||||| ||| Sbjct 505418 TCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGACTAT 505378 >seq146 Length=515804 Score = 147 bits (162), Expect = 4e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || |||||||| || | ||||| || | |||||| || ||||| || Sbjct 85986 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 86045 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 |||| |||||||| || |||||||| |||||||| || ||||| | |||||| ||| Sbjct 86046 AGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 86105 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | ||||||||| || ||||| |||||||| ||||| Sbjct 86106 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 86164 >seq799 Length=62795 Score = 111 bits (122), Expect = 3e-19 Identities = 196/278 (71%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 59378 GTCCCGACGCACACGGCGCCGCCAAAGGTGTCGCGAGAAACCTGGATGAAACGGTAGAAC 59437 || || || || | ||||||||| || | || || |||||| |||| ||||||||| Sbjct 6456 GTGCCCACACAAATGGCGCCGCCGAACCTATCTCGGTTAACCTGTATGACGCGGTAGAAC 6515 Query 59438 AGTTCCTGGACGGATCCAGCAGCGCGCTCAACCCAAGTCTGGTCGGG-GCGAACCTCGAA 59496 |||||||| || || ||| | |||||||||||||||| ||||| | | | | ||| Sbjct 6516 AGTTCCTGAGTGGCGCCGGCACCCTGCTCAACCCAAGTCTGCTCGGGTGTGGAGC-GGAA 6574 Query 59497 GAACTGGGGGGTCTGCACAATCGCGATCTTGCCGTCATGGGAAAAGTAGGGC-ATGATTT 59555 | || |||| ||||||||| || || ||| | || | || || | | | || | Sbjct 6575 CCATTGTGGGGACTGCACAATAGCAATTTTGTCATC-GGCGAGGTGTTCGACAACGAGCT 6633 Query 59556 CCTTGAGGTAGTCAGGGCGCGGACAGAAGTCAGCATCGAAGATGGCAAAGAAGGGGGCAG 59615 |||||| |||||||||| || ||||| || |||||||| || |||| || ||| Sbjct 6634 CCTTGACAAAGTCAGGGCGAGGGCAGAAATCGGCATCGAAAATAATAAAGTAGTCCCCAG 6693 Query 59616 TTGTCTTGGTGAA-TGCGTTGCGAAGGTTGCCAGCCTT 59652 | || ||| || | | | ||||||||||| ||||| Sbjct 6694 TGGTACGGGTAAAGTTCCAT-CGAAGGTTGCCTGCCTT 6730 >seq746 Length=2546576 Score = 98.7 bits (108), Expect = 2e-15 Identities = 436/672 (65%), Gaps = 29/672 (4%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | || ||| |||| || ||||| || || || |||||| Sbjct 915993 CGCCACTGGATGTACTCGGAAGGAGTCTTGTCGAGATGGTTATCGATGTGAGCGAAAGCG 915934 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGT-CGG 225099 ||||| | ||| || || || ||||| |||| | | ||| |||| || Sbjct 915933 TGCTGCTTAATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTGAGTGGGG 915874 Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || | ||| || ||||| || ||||| || |||| |||||| ||||| ||||| || || Sbjct 915873 ATGAG-CTCACCAGTGAGCACGTTGATCAGAGTAGACTTGCCAGCACCGTTGGGACCGAT 915815 Query 225160 CACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGT--TG---CTGAAGATCTCA 225214 ||| |||| ||||| || | ||| || | || || |||| | | | Sbjct 915814 GACGGCAATACGGGAGCCCAGAGAGCACTGGAAGGAGATGTCCTGGATCTGAGGCTTGGA 915755 Query 225215 GG-GCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGC-TTCATGATGGCACGGTCCTTGG 225272 || |||| |||| |||| || | | ||| | ||||| | |||||| Sbjct 915754 GGTACCAG---GGTACTGGAAGGACATG-TTGGTAGCACGGAGAATGGCCTTGGCCTTGG 915699 Query 225273 AAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTCA 225332 | | |||||| ||||| |||||||| ||||| ||| || | | || | Sbjct 915698 TCTTGACACCCTCGAGGAAACCGGGCTCAGGGAAAGTGAACTCCATCTCGGACTCACCAA 915639 Query 225333 GGTCGTAGTAAGA---TGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGA 225389 | ||||||||||| |||| |||| || || ||||| |||| |||||| || Sbjct 915638 GCTCGTAGTAAGACTTGGCAG--AGGGGTTGC-GGGCGACGAAGGCAGCCAGGTTACCCT 915582 Query 225390 GGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGCGTCA 225448 | | ||||||||| | |||||| || || || ||| | ||| || ||| Sbjct 915581 TATAGCGCTTGAGCTTGAAG---CGCTCGTAGTGGACGATGTGCTG-GCAGACGTTGTCG 915526 Query 225449 AGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTTGAGGTG 225507 ||||||||||||||||| || || |||||||| | || | | | | |||| | Sbjct 915525 AGGAAGCCAGAGTCGTGAGAGACGATGATGGAAGTGCAAG---GGGA-GTTGATGAGATA 915470 Query 225508 CGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAG 225567 | |||||| ||||| | || |||| ||||| ||||| ||||| |||||||| Sbjct 915469 CTCCTCGAGCCACTTAACGTTCTTCACATCCAAATGGTTGGTAGGCTCGTCAAGAAGCAG 915410 Query 225568 GATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGA 225627 || || | | | || || ||| || |||| |||||||| ||||| || || || Sbjct 915409 AATATCGGGAGCCTCGAAGACGGCACGGCACAGAGCGAGCTTCATCTTCCAACCACCAGA 915350 Query 225628 CAGGGAGCCGAT 225639 |||| || ||| Sbjct 915349 AAGGGCGCTGAT 915338 >seq816 Length=1283798 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || |||||||| | ||||||||| |||||| | |||| ||| |||||| || | | | Sbjct 1159742 TAACGCCACTGAAGGTACTGGTTAGGGGTCTTCTCCAAGTGCATCTCAACGTGCTCTAGA 1159801 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || ||||| | || | || || | |||||| |||||| || || || Sbjct 1159802 GCGTGCTGCTTGATATAACCAATACGAAGGTTGGGGTGCTTCTCAACCTTTCCGGTGGTA 1159861 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 || | ||||||||| |||| |||||| || || | |||||| ||||| ||||||||| Sbjct 1159862 GGGATAGTCTCGCCGGTAAGGAGCTTGATAAGAGTCGACTTGCCAGCACCGTTGGGGCCA 1159921 Query 225158 AT 225159 || Sbjct 1159922 AT 1159923 Score = 84.2 bits (92), Expect = 4e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGAC--GACACGTTCGTCAGGCCCTTG 225502 ||| ||||| || |||||||| || ||||||| ||| | | || | | |||| Sbjct 1160212 GTCCAGGAATCCGGAGTCGTGAGAAACAATGA--GACTGGTGATGTCGGGATGAGACTTG 1160269 Query 225503 AGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGA 225562 |||| | |||||| || | |||| || || | ||||| ||||||||||||||| Sbjct 1160270 AGGTAGTTCTCGAGCCAAGCGATGTTGGCAACATCAAGATGGTTAGTAGGTTCGTCCAGA 1160329 Query 225563 AGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCC 225622 || || | ||||||| ||| || || || | |||| ||||||||| ||||| || Sbjct 1160330 AGGAGAACGTCAGCACGCTGGAGCATAGCTCGGGCCAGAGCCAGCTTCATCTTCCAACCT 1160389 Query 225623 CCGGACAGGGAGCC 225636 || || ||||| || Sbjct 1160390 CCAGAAAGGGAACC 1160403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921612308234720