Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F001931975.2_202017-02-15] 876 sequences; 51,318,644 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq859 194 2e-44 seq13 181 1e-40 >seq859 Length=812484 Score = 194 bits (214), Expect = 2e-44 Identities = 543/820 (66%), Gaps = 29/820 (4%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| |||| ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 626415 GTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 626356 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 125872 || || || ||||| | | || ||| | |||| |||| | ||| Sbjct 626355 GAAGTCGAAGGGGTTGGTGGCCTTGTAAACCTTCTCGTTG-----CCAAGCGCGACAAGG 626301 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 |||||||| | |||| |||||||||||| ||| ||||||||||| |||| ||| Sbjct 626300 AGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGG 626241 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 ||| || || || || || |||| ||| |||||| ||||| || | ||| Sbjct 626240 GCACAAGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTAATGATA 626181 Query 125993 GCGTGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 126049 | || || | | | | || | | ||| | || | || ||| || |||| Sbjct 626180 TCCTGGATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCA 626124 Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109 || || ||| |||||||| ||||| |||||||| || || |||||| ||| || ||| Sbjct 626123 AAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGC 626064 Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169 |||||||| |||||||| | |||||| || | || | ||| ||||||||| ||| Sbjct 626063 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCC 626004 Query 126170 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCA 126228 || ||| ||||| |||| |||||||| ||||||||| | | | || | | | ||| Sbjct 626003 TCAACAGCAGCGAAAGCAACGAGACGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCA 625945 Query 126229 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288 || ||||| | ||||| || ||| || |||| ||||| || || | |||||| Sbjct 625944 TCGGATGGCCCAGTCGGCCTTCTTTCGGATGCAGGGGATGGTCTCAATGGCGTTAAAGAG 625885 Query 126289 TTCCTTCTTTTCTGA--TGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 126346 | || |||| || || |||||||| | || ||||| || || || ||| Sbjct 625884 GT--AGGTTCGCTGAGCGGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCG 625827 Query 126347 CCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 126405 ||||| | | ||| || | ||| | ||||||| | || || ||| ||||| Sbjct 625826 GAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAACGAGCCTCGGGGATCTG 625768 Query 126406 TACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 126464 ||||| | | ||| | | || ||||| ||||| ||||| ||| |||| | Sbjct 625767 GACCTC-GCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGACGCAGCGA 625709 Query 126465 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 126521 | || || ||||| | | ||| ||| |||| | ||| || | ||||||| Sbjct 625708 AGAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGT 625649 Query 126522 CGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 | | |||||||| || ||||| | |||||| |||||||| Sbjct 625648 CATGGAGATCCTTGGAAAGATCAATCTCCTCAGCAGTCCA 625609 >seq13 Length=1543628 Score = 181 bits (200), Expect = 1e-40 Identities = 1164/1843 (63%), Gaps = 45/1843 (2%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||| || || |||| || || ||||||||||| || |||||||| | Sbjct 382742 TGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGTCTTGAGGC 382801 Query 113625 CCTGCTTCCAGGCATACATA-TGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 113683 | |||||||| | | || | ||||| || | |||| | || || | |||| Sbjct 382802 CAAGCTTCCAGCC-TGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTCCTTCATG 382860 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 || ||||| ||||| ||||| |||||| || ||||| || ||||| | || Sbjct 382861 TGGATGTTCAGTGACTGGGACTGATCAATGAAGGCACCTCGATCAGCAGCCATCTGAACG 382920 Query 113744 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 113803 || | | || ||||| || || | || || ||| | ||| | ||||| Sbjct 382921 ACTTGGCGCTGAGAAATCTCCCAAACGGTCTTATACAGAGCCTTGACATCGGCAGGGATG 382980 Query 113804 TCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 113863 | || || |||||||| ||| | | | ||| | | ||||||| | | ||| Sbjct 382981 TTGGGAATGTTCTGGATGGAACCATTCTCAGCAATGATGCGGTTCTTCATAGCATCGGAC 383040 Query 113864 CAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCC 113923 || ||||| || | || |||| | || |||||||| |||||||| Sbjct 383041 CACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCA 383100 Query 113924 GCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCC 113983 ||||| |||| | ||||| |||| ||||| ||||| |||||||| ||||| ||| Sbjct 383101 GCGAGAACACGTCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCC 383160 Query 113984 AAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCC 114043 | || |||| ||| ||| || ||||| || || | ||| || |||||||||| || Sbjct 383161 AGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTACGGATGCCG 383220 Query 114044 TTTTCCCTAATGCGTTC-CTTGAGG-GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT 114101 | | | | | | | | || || | | |||||||| || | | || | | Sbjct 383221 TGTGTCTTGA--CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAGGGCTTGACGT 383278 Query 114102 GCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATG 114161 |||||| || |||||||||||||| | ||||| || || || | || || ||| | Sbjct 383279 TCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGGGAACCTTTGAAGGTGGAGTAGG 383338 Query 114162 GGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 114218 | ||||| ||| |||| | ||||| | | ||||| ||||| || || |||| Sbjct 383339 GACCCTCCTCCTTAGCCAGCTGCACGGAGGCAGTC---AGGGCAGCGTGGTAAATGGTCT 383395 Query 114219 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-A 114277 | || || | || | | |||||| || || || | | || || | | Sbjct 383396 CGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATGCG-CAGAGCA 383454 Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337 | || |||| || || || || ||||| || ||||| || || || | ||| ||| Sbjct 383455 AGGAAAGCATCGGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTG 383514 Query 114338 TTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 114397 || ||||| || || || || ||| |||||| | | | || || || | Sbjct 383515 TTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATA 383574 Query 114398 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TG 114454 ||||||| ||| | || | ||| | | | || | || || ||| || | || Sbjct 383575 ACAACCTGACTGACCTTGTGCAACTTCTTGAAGTCGTA---GCAAGCCTCATCGTAGTTG 383631 Query 114455 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 114514 | | || || || | || || || || || |||| | ||| || || | Sbjct 383632 ATGAAAGAGGGCAGAGCCAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAG 383691 Query 114515 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 114574 ||||| |||||||| || |||| || || || ||||| || | ||||||||| || Sbjct 383692 TACTCAATAATTTCAGTGCACAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTG 383751 Query 114575 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 114634 ||| ||| || ||||||||||| |||||| |||| | || ||||| || |||| | Sbjct 383752 CTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCC 383811 Query 114635 TTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAG--TGGCGTTGGCTCGCCCCTCC 114691 | ||||| || | ||| | || | | || | | || | ||| || | |||||| Sbjct 383812 TCAAGAATGGCGTACCAAAGTTTCTGAGCCTTG-ATAGTCTTGCG-ACCCTTG-CCCTCC 383868 Query 114692 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 114751 | |||||||||| ||| || || || ||||| || || | || | ||| || || Sbjct 383869 TTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGG 383928 Query 114752 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGG 114811 || | ||||| | || | ||| | || || ||||||||||||||||| || Sbjct 383929 CACTCGTTGGGGCACATCAGCGTCCAGTCGCCGTTCTTTTCAACACGCTTCATGAAAAGA 383988 Query 114812 TCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 114871 || |||||||| || || ||| || || || || | || || | || || || Sbjct 383989 TCAGGGATCCAAAGGGCGAGGAAAAGGTCACGGGCACGGACCTCCTCTTTACCGTGGTTC 384048 Query 114872 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 114931 ||| | || | || || | || ||| | |||||| || || ||||| | || | Sbjct 384049 TTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAA 384108 Query 114932 G-AC-----CCCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACG 114985 | || | ||| | | ||| |||||| ||||| | || ||| || || || Sbjct 384109 GCACCGGGTCGCTT--GTTG-CCACCCTGGTCGACATAGCGAGCAGTGTTGTTGAAGACA 384165 Query 114986 CGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTAT 115043 |||||||| |||| | ||| | ||| || || || || ||| || ||| | | Sbjct 384166 CGAAGCATAGGAACAACACCGTTCGATGTACCGTTGGTACCGGCGATGTAGGAGCC--AG 384223 Query 115044 TGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGC 115103 | || | || | || | || || ||||||||| || ||| ||| ||||| || | Sbjct 384224 TAGCACGGATACGGTGCACGTTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCAC 384283 Query 115104 ACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGC 115163 | | ||||| | ||||||| || || || ||| |||| | | | | ||||| Sbjct 384284 AGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGC 384343 Query 115164 AGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 115223 | |||| ||| ||| || || || ||||||||||| || || | || || ||| Sbjct 384344 AAGATGACAATTGGGGCTGAGGGGTGCCGGCGTTGAAGAGCGTGGGAGAGGCATGTGTGA 384403 Query 115224 ACA--TACCTTGGGACATCTTATCGTAGGTCTCCAAGAC-GGCGGGAATGTCTTCCCCGT 115280 | | | || ||||||| | ||| ||||||||||| || | || || || || Sbjct 384404 AGAATTTGCT--GGACATCAGGTTGTATGTCTCCAAGACTCGCTCG-ATATCATCACCCC 384460 Query 115281 GAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGA 115340 |||||| | || || ||||| | ||||| || || || | | |||| || | Sbjct 384461 AAATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAA 384520 Query 115341 GCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 | | ||||||| |||||| ||||||| ||||| || Sbjct 384521 TCTTGAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 384563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597347058978080