Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F001931975.2_202017-02-15] 876 sequences; 51,318,644 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq13 242 4e-59 >seq13 Length=1543628 Score = 242 bits (268), Expect = 4e-59 Identities = 1061/1666 (64%), Gaps = 32/1666 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||| ||||| || |||||||||||||| || || | | Sbjct 384569 TACCAATACTTTGGCTTCAAGACTTTGGAGCGATCATACCTCCTCAAGATTGACGGTAAG 384510 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||||| || || || || | ||||| || | | || ||| || | || Sbjct 384509 ATTGTCGAGCGCCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATTTGGGGTGATGAT 384450 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCAC 93896 || | || ||| | | | || ||| ||| | || |||| || | Sbjct 384449 ATCGAGCGAGTCTTGGAGACATACAACCTGATGTCCAGCAAATTCTTCACACATG-CCTC 384391 Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956 || || || |||||||| || ||||| ||| || |||| || || ||| || | Sbjct 384390 TCCCACGCTCTTCAACGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGA 384331 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| |||| || ||||| | ||| | |||||| |||||| | ||||| Sbjct 384330 TATGAAGGACGACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTC 384271 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074 || || || || || || | | || ||| |||| ||||| | || |||||| Sbjct 384270 CAAGATGGCTGGTGGTATTGGTCTGAACGTGCAC--CGTATCCGTGCTACTGGCTCCTAC 384213 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||||||||| || || || ||||| | || |||||||| || |||||||||||| Sbjct 384212 ATCGCCGGTACCAACGGTACATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAAC 384153 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || ||||| || ||||||||||| | | | ||| |||| || |||| ||| Sbjct 384152 ACTGCTCGCTATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTC 384093 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||| | || || | ||| | || || || ||||||||||| || || Sbjct 384092 GAGCCTTGGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAG 384033 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | ||| | ||||| ||| ||| || ||| | || || ||||| ||||| || Sbjct 384032 GAGGTCCGTGCCCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGT 383973 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || || || ||| || ||||| || | || ||||| || || || || || ||||| Sbjct 383972 GTTGAAAAGAACGGCGACTGGACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGAC 383913 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434 | ||| | || || | |||| | ||||| | ||||||||| | Sbjct 383912 TGCTACGGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGC 383853 Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494 ||| ||| | ||| ||| || ||| | || | || | ||| ||||| || Sbjct 383852 AAGACTATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGA 383793 Query 94495 ACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554 | || | ||| | | |||||| | |||| |||| |||||| || ||||||| Sbjct 383792 AACCCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGT 383733 Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614 ||| ||||| || |||||||| || ||| | ||||| | | || |||||| | Sbjct 383732 ACCATCCGAAGCTCCAACCTGTGCACTGAAATTATTGAGTACTGTGCCCCTGACGAGGTC 383673 Query 94615 GCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCT 94674 ||||| || ||||| | ||| | ||| || ||||| | | | |||| | Sbjct 383672 GCTGTCTGCAACCTTGCCTCTCTGGCTCTGCCCTCTTTCAT-CAA-----CTAC---GAT 383622 Query 94675 ACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT--GAACC 94732 |||| | ||| | || || | || | | | ||| || | || |||| Sbjct 383621 GAGGCTTGCTACGACTTCAAGAAGTTGCACAAGGT--CAGTCAGGTTGTTATTCGCAACC 383564 Query 94733 TGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGA 94792 |||||| | | ||||| |||| |||||| |||| |||||| ||| ||| || Sbjct 383563 TGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGC 383504 Query 94793 AGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTC 94852 || || ||||| || | || || ||||| | || || || | | |||| Sbjct 383503 GCCACCGACCCATTGGTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCTTGCTCTGCGCA 383444 Query 94853 TGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATT 94912 |||||| ||| || ||| || | | || | | || ||||| | |||||| Sbjct 383443 TGCCCTTCGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTACC 383384 Query 94913 ACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGT 94972 ||| ||| ||| ||||| || |||| | ||| | || || || | | Sbjct 383383 ACGCTGCCCTGACTGCCTCCGTGCAGCTGGCTA---AGGAGGAGGGTCCCTACTCCACCT 383327 Query 94973 TCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCT 95032 || || || ||| |||| || | ||||||||| | ||| || ||||||| Sbjct 383326 TCAAAGGTTCCCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCT 383267 Query 95033 CGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACG 95092 | | || | |||||||| |||| || | || || | | |||||| | ||| Sbjct 383266 CTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGCATCCGTAACA 383207 Query 95093 CGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGT 95152 ||||| | || || ||||| || ||| || | ||||| || ||||||||||||| Sbjct 383206 GTCTGCTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGT 383147 Query 95153 CGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCG 95212 ||||| |||| |||||||||| | ||| | | || || ||||| || || |||| | Sbjct 383146 GCTTCGAGCCCTACACCTCCAACATCTACCAACGACGTGTTCTCGCTGGTGAGTTCCAGG 383087 Query 95213 TCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAAGGTC 95271 | ||||| || || ||||| || || | ||||| ||||| || | Sbjct 383086 TTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGCTATG 383028 Query 95272 AAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGA 95327 ||||||| | |||| | || || ||| |||||||||| || | || || | Sbjct 383027 AAGAACCGCATCATTGCT----GAGAATGGTTCCATCCAGAACATTCCCAACATCCCTGC 382972 Query 95328 GGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || ||||||| || || |||||||| |||||||| | |||||| Sbjct 382971 CGATGTCAAGGCTCTGTATAAGACCGTTTGGGAGATTTCTCAGCGC 382926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494717782780960