Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F001931975.2_202017-02-15] 876 sequences; 51,318,644 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq440 334 1e-86 seq434 89.7 7e-13 seq18 89.7 7e-13 >seq440 Length=1124088 Score = 334 bits (370), Expect = 1e-86 Identities = 992/1529 (65%), Gaps = 27/1529 (2%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || || || ||||| || || || | | ||| || || || || || || Sbjct 483292 TCATCCTCCTCCTTGTACTTCTCAGCGTCGTTAAGCATGCGCTCGATCTCCTCCTTGGAC 483233 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| ||||| |||||| | ||| || || | | |||| || | Sbjct 483232 AGGCGGCCCTTGTCATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACG 483173 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||| ||||| || ||||||| |||||| | || | ||| || || | Sbjct 483172 GCGGAGACGTTCATGATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGAACA 483113 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | || ||||| || | || || | || | | |||| ||| | Sbjct 483112 CCACGGGGGGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATAAGGTTGTTGTCCTTG 483053 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | || ||| ||||| || ||||| | || || |||| || || || Sbjct 483052 GTGCGCTGACGCTCACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAG 482993 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | || || || || || | || || | | |||| Sbjct 482992 GTGGAGAAGACCTCAGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGGATGAGCTTGGTC 482933 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| || |||| |||||||| || || | || || ||| | ||| Sbjct 482932 ATCATACCACCAGCGGTCTCGATACCAAGAGAGAGGGGCGCAACATC---GAGAAGCAGA 482876 Query 6989 -TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACC 7036 ||| | || || |||| |||| | | || || || ||||| Sbjct 482875 ATCTCG------TTGGTGGCCTTGCTGGAGGTGTCACCGGAGAGAATCGCAGCCTGGACG 482822 Query 7037 GTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTA 7096 | || ||||| || || |||||||| ||||| || | || || | || || |||||| Sbjct 482821 GCGGCACCGTAGGCAACAGCCTCATCAGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTA 482762 Query 7097 AAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACG 7156 || || || | | | | || | ||||| || || || |||||||| | ||| Sbjct 482761 AAGTAGTCGGTGATGAGCTTCTGGACACGGGGGATACGGGTAGAGCCACCGACGAGGACG 482702 Query 7157 ATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCC 7216 || || | || || || |||||||| | ||| ||| ||||| || | Sbjct 482701 ATCTCGTGGACGAGGGACTTGTCGATCTTAGCGTCGGTAAGGACACGGTCGACGGGCTGG 482642 Query 7217 ATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTA 7276 ||| ||||| | ||| || || ||||| ||||| |||||||| ||||| || Sbjct 482641 ATAGTGGATCGGAAGAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGAGGTG 482582 Query 7277 TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT 7336 ||||| || | || ||| | | || || || || |||| || || || | ||||| Sbjct 482581 TAGAAGTCGATACCCTCGAAGAGAGAGTCGATCTCGATGGAGGTCTGAGCAGAAGAAGAA 482522 Query 7337 AACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCG 7396 | |||||||| || ||||| || || ||||| | ||| || || || || ||| | Sbjct 482521 AGGGTTCGCTTGGCACGCTCGCAAGCAGTTCGGAGACGTCGCAGAGCGCGGACGTTGGTG 482462 Query 7397 GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAA 7456 || ||| ||||| || || || || || || | |||||| | || | Sbjct 482461 CTAAGATCCTTCTTGTGCTTTCGCTTGAATTCGTTTACGAAGTGGTTGACCAGACGGTTG 482402 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 482401 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCGGTAGACTTGACCTCGAAGATACCC 482342 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | |||||||| || ||||||||||| || || || ||||| ||| Sbjct 482341 TCCTCAATGGTAAGGAGAGAAACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACG 482282 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| || |||||||| || || || || || || || || Sbjct 482281 TTGCGCTCGCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCAGTAGGCTCG 482222 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || || ||| ||| || || || || | ||||| || || ||||| || Sbjct 482221 TTGATGATTCGGAGAACGTTGAGACCGGCGATGAGACCAGCATCCTTGGTAGCTTGACGC 482162 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || |||||||| |||||||| ||||| || || || |||| |||| ||| ||||| Sbjct 482161 TGAGAATCGTTGAAGTAGGCGGGGACAGTAACAACAGCGTTGTTGACAGTCTCGCCGAGG 482102 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| ||||| || | ||| | || ||||| || | | Sbjct 482101 TAAGACTCAGCGGTCTCACGCATCTTGGTGAGGATCATGGCGGAGATCTCCTCGGGGGTG 482042 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || || || || || || || ||||| || || |||| ||| || | | | Sbjct 482041 AAGGTCTTGGTCTCGCCCTTGAACTCAACCTCGATGTTGGGCTTA---CCACCCTTGTCG 481985 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | | ||| | | | | ||||| ||| | ||||||| | || | ||||| | Sbjct 481984 ACGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGGATCGGCGAACTTGCGA 481925 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| | ||||| || || || || ||||| | |||||||||||| ||||||||| Sbjct 481924 CCGATCAATCGCTTGGCGTCGAAGACAGTGTTCTGGGGGTTCATGGCGACTTGGTTCTTG 481865 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || || || ||||| || | || || || ||||| | || ||||| ||| Sbjct 481864 GCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTT 481808 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTC 8085 || || || |||||||| || || || || Sbjct 481807 CGGTTACCCTGGTCGTTGGCGATGATATC 481779 Score = 168 bits (186), Expect = 8e-37 Identities = 366/544 (67%), Gaps = 13/544 (2%) Strand=Plus/Plus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| || ||||| ||||| | ||| || | |||||| | | || Sbjct 174478 AGGTCCTCGAAACGGGCGCGGGTGATGGACATGGTGAAGTCCTCACCGTCGAAGAGAGAG 174537 Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 ||||| |||||||| | || || || | ||| | || ||||| || |||||||| | Sbjct 174538 TCAATCTCAATGGTGGCCTGGGCACCGCTGGAGAGA--GTACGCTTGGCACGCTCACAAG 174595 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | ||||| | ||| || |||||||| | | || || | || ||||| || || Sbjct 174596 CAGTTCGGAGACGTCGGAGGGCACGGGCATCGCCAGAGAGGTCCTTCTTCGTCTTTCGGC 174655 Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481 ||||| | | |||| |||||| | | |||||||| | |||||||| || | Sbjct 174656 CGAACTCCTTCTTGCAGTGGTCAAGGAGGTTGGTGTCGAAATCCTGTCCACCCAAATGGG 174715 Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541 |||| || ||||| || ||||| |||| ||| || | ||||| | | || |||| Sbjct 174716 TATCACCAGCGGTAGCCTTGACGGTGAAGACACCACCCTGGATGTTGAGGAGGGAGACAT 174775 Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTAT 7601 | || ||||||||||| || || | ||||| ||||| || | ||| | |||| Sbjct 174776 CGAAAGTACCACCACCGAGATCGTAGATGAGAACGTTGCGCTC--CTTCTCAG-ACTTAC 174832 Query 7602 CG------AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 || |||||||| || || || || || || || || || || ||||| || || Sbjct 174833 CGGCACCAAGACCGTAGGCAATGGCGGCGGCAGTAGGCTCGTTGATGATACGGAGGACGT 174892 Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 | || |||||||| | | || || || || || || || || ||||| ||||||| Sbjct 174893 TGAGACCAGCAATGGAACCGGCGTCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGG 174952 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775 | ||||| || | ||| || | | ||| ||||| ||||| | | || || || || | Sbjct 174953 CAGGGACAGTGATGACGGCCTTCTCGACCTTCTTGCCGAGCTTGGTCTCGGCAATCTCCT 175012 Query 7776 TCAT 7779 |||| Sbjct 175013 TCAT 175016 >seq434 Length=336534 Score = 89.7 bits (98), Expect = 7e-13 Identities = 191/280 (68%), Gaps = 4/280 (1%) Strand=Plus/Plus Query 22490 CTCCACAAAATGAAAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGA 22549 ||||||||| || | || | || ||||| |||||||||| || | || ||| Sbjct 214991 CTCCACAAACAGAGGAGACCTCCTTCCACCCGGTATCACCATATGCTGTTACCAAGTTGT 215050 Query 22550 TGGGATATTGGGCGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTA 22609 | ||| ||| | || || |||| | |||| ||||||| | ||| | ||||||| Sbjct 215051 TCCAATACTGGACTACTGTCAATTTTCGAGAGGCATACGGCTTCCATGCCTCGAATGGTA 215110 Query 22610 TAATGTTCAACCACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAAC-A 22668 | | |||||||| |||||||||||||||||| | ||||| || ||||| || || | Sbjct 215111 TTCTCTTCAACCATGAATCACCGAGACGGGGTACCACTTTCGTCACCCGAAAGATCACTA 215170 Query 22669 CTC-GGTGTCGCTAATATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGA 22727 ||| || | |||| | ||| || || | | | || | ||| || || || || Sbjct 215171 CTCAAGTAGCTTTAAT-TGCCTGC-GGAAAGTTAGACTTCTTCTCCCTAGGGAATCTGGA 215228 Query 22728 TGCGAAACGAGATTGGGGTCATGCACGCGATTACGTGAAA 22767 ||| ||||||||||| |||||| |||||| || || Sbjct 215229 CGCGGTTCGAGATTGGGGCCATGCAAAAGATTACATGCAA 215268 >seq18 Length=1090014 Score = 89.7 bits (98), Expect = 7e-13 Identities = 168/244 (69%), Gaps = 5/244 (2%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || || || || ||||| || || || |||||||| Sbjct 118723 ATCGAAATCCTCACCACCGAGATGGGTGTCACCAGCGGTAGCCAGAACCTCGAAGATACC 118782 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||||| | | || ||||| || ||||||||||| || || | || | Sbjct 118783 GTCATCAATGGAGAGAAGGGAGACATCGAAGGTACCACCACCAAGATCGTA---GACGAT 118839 Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | || | ||| || | | | |||| || |||||||| |||||||| || || || || | Sbjct 118840 GATC-TGTCGCTCACCGTCGGTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCT 118898 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || | || || ||| ||| || || ||||| | | ||||| || || || |||| Sbjct 118899 CGTTGACGATTCGGAGAACGTTGAGACCGGCAATGATACCGGCATCCTTGGTGGCCTGTC 118958 Query 7695 GTTG 7698 | || Sbjct 118959 GCTG 118962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635125845295840