Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F001931975.2_202017-02-15] 876 sequences; 51,318,644 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq13 250 3e-61 seq12 104 3e-17 seq859 91.5 2e-13 >seq13 Length=1543628 Score = 250 bits (276), Expect = 3e-61 Identities = 1085/1694 (64%), Gaps = 63/1694 (4%) Strand=Plus/Plus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATA-TGCATTGAAGA 109466 ||||| || ||||| || || ||||| ||| |||||| || | || | ||||| | Sbjct 382774 CGAAGGTAGTACATGCCAGTCTTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTGGT 382832 Query 109467 GAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAA 109526 || ||| | || || || ||| | ||||| ||||| |||||||| ||||| Sbjct 382833 GATCTTGCCCATCGTGGGGTCCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAA 382892 Query 109527 TCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCT----AATTTCCCAGACAG 109582 ||| |||||||| ||||| | | || ||| ||| ||| ||||| || | Sbjct 382893 GGCACCTCGATCAGCAGCCATCTGAACGA----CTTGGCGCTGAGAAATCTCCCAAACGG 382948 Query 109583 TCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCAC--- 109639 |||| |||| | ||||| ||| | || |||| ||||| || || || ||| Sbjct 382949 TCTTATACAGAGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGGATGGAACCATTCT 383008 Query 109640 CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT 109699 |||| | | || | | |||||| | | ||||| ||||| | | | || | || Sbjct 383009 CAGCAATGA---TGCGGTTCTTCATAGCATCGGACCACAGACCCA---TGTCGACAAGGT 383062 Query 109700 CAACAAGATGCTTG---TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGA 109756 | || || | ||||| || || |||||||| || ||||| |||||| Sbjct 383063 CCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGAACACGTCGTTGGTAGA 383122 Query 109757 TGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTG 109816 |||| | |||||||| ||||| ||||| |||||||| || || || | || || | Sbjct 383123 TGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAG 383182 Query 109817 TGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCA 109876 | ||||| ||||| | ||| |||||||| |||| || | ||||| || ||| || | Sbjct 383183 TAGGCATAGGAGCAAGGAGCAGACTGTTACGGATGCCGTGTGTCTTGACTTCCTCTCGAA 383242 Query 109877 TTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAA 109936 | ||||| || | | || | || | | |||||| || || | Sbjct 383243 GAGTCTCCCAGTCCCAGAGGTCAGAG------GGCTTGACGTTCCACATGTCGAACTGGA 383296 Query 109937 GTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCA 109996 | | |||||||| || || ||||| ||||| | ||| | ||||| ||| |||| Sbjct 383297 GGATACCCTCAGAGGCGGGGGAACCTTTGAAGGTGGAGTAGGGACCCTCCTCCTTAGCCA 383356 Query 109997 ACT---CGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCA 110053 || |||| | || | || || || || || || ||||| || || || || Sbjct 383357 GCTGCACGGAGGCAGTC---AGGGCAGCGTGGTAAATGGTCTCGAAGATCTGC---TTGT 383410 Query 110054 TGAGG---CGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATCCGCT 110109 |||| |||| ||| | |||||||| | | || || || || |||| || Sbjct 383411 TGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATCGGCA 383469 Query 110110 AGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCT 110169 || ||||||||||| ||||||||||| || || ||||||| | ||||| | Sbjct 383470 AGGCCCTGAACACCAAGACCAATGGGTCGGTGGCGCATGTTACTGTTGCGAGCCTCCTGG 383529 Query 110170 ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATT 110229 || ||||| ||| ||||||| | || || || | ||| || ||| Sbjct 383530 ACAGGGTAGTGGTTCACATCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACC 383589 Query 110230 TCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACATATTTGGGGAGAGC 110288 | || | || | | | ||| | | | || | || |||| | ||| ||||| Sbjct 383590 TTGTGCAACTTCTTGAAGTCGTA-GCAAGCCTCATCGTAGTTGATGAAAGAGGGCAGAGC 383648 Query 110289 AATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGT 110348 | ||| ||||| ||||| |||| |||||| | | ||| || | |||||| || Sbjct 383649 CAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAGTACTCAATAATTTCAGT 383708 Query 110349 ACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGC 110408 |||| |||||| || ||| ||| | |||||| || || ||| |||||| || Sbjct 383709 GCACAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGC 383768 Query 110409 ATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCA 110468 |||||| ||||||||| ||||| | || || || ||||| | || |||||||| | ||| Sbjct 383769 ATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGCCTCAAGAATGGCGTACCA 383828 Query 110469 TACATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTAC 110526 | | || || ||| |||| | | || |||| ||||||||| |||| Sbjct 383829 AAGTTTCTGAGCCTTGATAGTCTTGCG--ACCCTTGCCCTCCTTCTCGTACTTTTCGTAC 383886 Query 110527 AAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAG 110586 | |||| || |||| |||||| || | || || || || ||| || | Sbjct 383887 AGAGCCTCGAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATC 383946 Query 110587 AGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCC 110646 || | ||| | || || ||||| | ||||||||| || ||||| ||||| | || Sbjct 383947 AGCGTCCAGTCGCCGTTCTTTTCAACACGCTTCATGAAAAGATCAGGGATCCAAAGGGCG 384006 Query 110647 GAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAG 110706 ||||||||||||| ||| |||| || | ||| ||||| || || || | || Sbjct 384007 AGGAAAAGGTCACGGGCACGGACCTCCTCTTTACCGTGGTTCTTACGGAGATCAAGGAAC 384066 Query 110707 TCCATGATATCCGAGTGCCATGGTTCGAGATAG------ACAGCGATGGATCCCTTACGA 110760 || | || ||| |||||||| || ||||| ||| | ||| || || ||| | Sbjct 384067 TCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTT--GT 384124 Query 110761 CGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATT 110820 | || |||||| |||||||| || ||| |||||||| | |||||||||| || Sbjct 384125 TG-CCACCCTGGTCGACATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACA 384183 Query 110821 CCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATA 110880 || | ||| ||| || ||||| || ||| | | ||||| || ||| | Sbjct 384184 CCGTTCGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCACGGATACGGTGCACG 384243 Query 110881 TGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATA 110939 | || |||||||||||| ||| ||| || ||||| ||| |||| ||| | || Sbjct 384244 TTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCT-TGAGAGTATCGTA 384302 Query 110940 AATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACG 110999 || || ||||| || |||| | ||| | |||||||| |||| || || | Sbjct 384303 GATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTG 384362 Query 111000 AGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATC 111057 ||| || || || |||||||| || || | ||||| ||| ||| ||| ||||||| Sbjct 384363 AGGGGTGCCGGCGTTGAAGAGCGTGGGAGAGGCATGTGTGA--AGAATTTGCTGGACATC 384420 Query 111058 TTGTTGTATGTGTC 111071 ||||||||| || Sbjct 384421 AGGTTGTATGTCTC 384434 >seq12 Length=301023 Score = 104 bits (114), Expect = 3e-17 Identities = 250/373 (67%), Gaps = 18/373 (5%) Strand=Plus/Plus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651 ||||||||||||||| ||||||| |||||| | || ||| |||||||||||| Sbjct 21794 GAAACCGTCCATTTCAGTGAGAATCTGGTTCAGAGTTGCTTCCCGCTCATCGTTGCCAC- 21852 Query 11652 CATACCACCTGCCGAACGCTTCTTACCGACA-------GCGTCAATCTCATCGATGAATA 11704 || | | || |||| | | | | | || |||||||||||||| ||||| | Sbjct 21853 CAAATCCCCGGCCGCTCTCCTGTCGCGCACGTCCAATTGCGTCAATCTCATCAATGAAGA 21912 Query 11705 CGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAA 11764 ||| || || ||| |||| | | |||| | || | ||||| | || | Sbjct 21913 TGATGCAAGGGGCGTTCTTACGTCCTTCGGCGAACAAATCTCTCACACGTGAAGGACCGA 21972 Query 11765 CACCTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAGA 11822 |||| || ||||| |||||||| | | | || | ||||||| ||| || || ||| Sbjct 21973 CACCGACAAACATTTCAACGAACTCAGAACCGCTCA-CACTGAA-GAATGGTACTCCAGA 22030 Query 11823 CTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAG 11882 ||| || || |||| || || | |||||||| |||||||| | |||||| | | Sbjct 22031 CTCGCCGGCCGTGGCCTTGGCAAGCAATGTCTTACCGGTACCAGGAGGACCAGCTAAGAT 22090 Query 11883 GGCGCCACGGGGGATCTTGGCACC---ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAA 11939 || || || |||||||||||||| || | || | ||| |||| ||| ||||| Sbjct 22091 AGCACCTCGAGGGATCTTGGCACCTAGCTTTTCGAATT---TCTCGGGCTGCTTCAGGAA 22147 Query 11940 GTCCACAATCTCC 11952 | ||||| |||| Sbjct 22148 GCTCACAAACTCC 22160 >seq859 Length=812484 Score = 91.5 bits (100), Expect = 2e-13 Identities = 207/303 (68%), Gaps = 9/303 (3%) Strand=Plus/Minus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || ||||| || ||||| |||||||||||||| || |||| || || Sbjct 626127 GGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACC 626068 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||||| || | ||||| ||||| ||||| | || ||| |||||||| Sbjct 626067 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGAT 626008 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GA 119670 ||||| ||| |||||||| | ||||||| || ||||| ||| ||| || || Sbjct 626007 ACCCTCAACAGCAGCGAAAGCAACGAGACGCTGGGC-AAAGGAGGAGTCCTTATCCTGGA 625949 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTC-TATGCAGGGGACAGTTTGGATGGC-TTC 119728 ||| || ||||||| |||||| | || |||||||||| || | ||||| || Sbjct 625948 TCCATCGGATGGCCCAGTCGGCCTT-CTTTCGGATGCAGGGGATGGTCTCAATGGCGTTA 625890 Query 119729 GAAAAGTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGT 119788 | | || | ||| | ||| ||||| || || | |||||||| |||||||| Sbjct 625889 AAGAGGTAGGTTC-GCTGAGCGGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGT 625831 Query 119789 CTC 119791 ||| Sbjct 625830 CTC 625828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588969550712800