Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F001931975.2_202017-02-15] 876 sequences; 51,318,644 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq859 154 2e-31 seq13 132 8e-25 seq430 114 2e-19 >seq859 Length=812484 Score = 154 bits (170), Expect = 2e-31 Identities = 234/329 (71%), Gaps = 7/329 (2%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| || || ||| ||| | |||||| ||| || ||||||||||| || ||||| Sbjct 626109 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCACGCTT 626050 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||| | ||| || ||| ||||| ||||| || || || || Sbjct 626049 CTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCCTCAACAGCAGCGAA 625990 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | ||||| |||| |||||| | | | ||| | | |||||| || ||||| Sbjct 625989 AGCAACGAGACGCTGGGCAAAGGAGGA---GTCCTTATCCTGGATCCATCGGATGGCCCA 625933 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 || ||||| || | | |||| | || || |||||| |||||||| | ||| | Sbjct 625932 GTCGGCCTTCTTTCGGATGCAGGGGATGGTCTCAATGGCGTTAAAGAGGTAGG--TTCGC 625875 Query 794580 -GACCGGG-TCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 || |||| ||||||| ||||||||| ||||| || ||||||||||| ||||||||||| Sbjct 625874 TGAGCGGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTC 625815 Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || |||||||||||| || ||||| Sbjct 625814 TCCATCATGATCTGGAAGCCGTAGAAGCA 625786 Score = 109 bits (120), Expect = 9e-18 Identities = 179/257 (70%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 ||| || ||||| || ||| | || ||| |||||| |||||||||||||| | || Sbjct 626430 GACACCGGCCTTCTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAG 626371 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011 ||||| |||||| | ||| ||||||| | | ||| ||||||| || || Sbjct 626370 GGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAAACCTTCTCGTTGCCAAG 626311 Query 794012 CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071 || |||| || || || |||||||| ||||||||||| ||||||| | | |||||| Sbjct 626310 CGCGACAAGGAGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCAT 626251 Query 794072 GCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131 ||||| || || || || | ||| ||| ||||| | ||| || |||||| || Sbjct 626250 GCCGAGAAGGGCACAAGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATC 626191 Query 794132 GATGATGATCTGCCTGG 794148 | ||||| | ||||| Sbjct 626190 AGTAATGATAT-CCTGG 626175 >seq13 Length=1543628 Score = 132 bits (146), Expect = 8e-25 Identities = 184/258 (71%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||||||||| || |||| ||| ||||| || ||||| || |||| ||||| || Sbjct 384132 CTGGTCGACATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACACCGTTCGA 384191 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||| || || | ||||| ||| | || || | |||| || | || Sbjct 384192 TGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCACGGATACGGTGCACGTTCAGACC 384251 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || ||| ||||||||| | || || | || || || |||||||| ||||| Sbjct 384252 AATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTC 384311 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || |||| ||||||| || | || ||||| || || ||| || | | ||||| Sbjct 384312 AATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCC 384371 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||| |||||||||||||| Sbjct 384372 GGCGTTGAAGAGCGTGGG 384389 Score = 98.7 bits (108), Expect = 2e-14 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||||||||| |||||||||||| |||| || || ||| | | Sbjct 1159926 GTACTTGGTGACAGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGCTCACCGGGGAG 1159985 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| ||||| || | ||||||||||| |||| Sbjct 1159986 GATGAGGCGGACAGAAGTCTGGATCTCTCGGG 1160017 >seq430 Length=1123370 Score = 114 bits (126), Expect = 2e-19 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710 |||||||||||||||||||||| || || ||| | || |||||||| || || ||| | | Sbjct 1081718 CCAACTACCTCGACATCAAGCCTCTTCTTGATGTCGGCTGCAAGACTGTTGCAAACATGA 1081777 Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 ||||||||||||| ||||| || ||||||||||| || ||||| | | ||| Sbjct 1081778 TCAAGGGCAAGTCTCCCGAAGAGATCCGCAAGACTTTCAACATTACGAACG 1081828 Score = 91.5 bits (100), Expect = 2e-12 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 2019204 GGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAG 2019263 || ||||| || | | ||||||||||| |||||| || | || |||| || ||||| Sbjct 23609 GGGCGCCATAAACTTGTTATCCTCGATGAAGCCGACAGCATGACTTCGGGTGCTCAGCAA 23668 Query 2019264 GCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAAC 2019323 ||||| || || ||||| | ||| ||||||| || || || || | ||||||||| Sbjct 23669 GCCCTTAGACGAACTATGGAGATCTACTCCAACACTACACGATTCGCTTTTGCCTGCAAC 23728 Query 2019324 ACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATC 2019368 ||| | | |||||||| |||||||| || ||||||||| Sbjct 23729 CAGTCCAACAAGATCATCGAACCCCTCCAGTCACGATGCGCCATC 23773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916153215884564