Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F001931975.2_202017-02-15] 876 sequences; 51,318,644 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq437 125 5e-24 seq426 122 6e-23 seq146 98.7 6e-16 >seq437 Length=608608 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||| ||||||||| ||||| ||||| ||| |||| |||| Sbjct 261021 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGTCCATCC 260962 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||| ||||| |||||||| | || | ||||||||||| Sbjct 260961 TCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 260902 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || |||| ||| || ||| Sbjct 260901 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 260842 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||||||||| || || |||||||| Sbjct 260841 TTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 260810 >seq426 Length=1359975 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| || ||||||||| ||||| ||||| | | |||| |||| Sbjct 506039 AGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGGCCATCT 505980 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || |||||||| || || ||||| || | || | ||||||||||| Sbjct 505979 TCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCT 505920 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | ||| ||| |||||| |||| ||| |||||| Sbjct 505919 TGAATCTTGCTCTTCACGTTGTCAATAGTGTCACTGGACTCGACCTCAAGGGTGATGGTC 505860 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| ||||| ||||| |||||||| Sbjct 505859 TTTCCGGTGAGTGTCTTCACAAAAATCTGCAT 505828 Score = 109 bits (120), Expect = 4e-19 Identities = 145/199 (73%), Gaps = 8/199 (4%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| || || || || |||| | || || || ||||| |||||||| Sbjct 505281 CTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 505222 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| ||||||||||| | || | ||||||||||| | || || ||||| | Sbjct 505221 AATCAAGCGTTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGAC--A 505164 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | | ||||| || || ||| || || | ||| |||||||| || || | ||||| Sbjct 505163 T--TGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCT 505106 Query 34962 TTACAAAGATCTGCATGAT 34980 | || |||||||||||||| Sbjct 505105 TGACGAAGATCTGCATGAT 505087 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| ||| |||||||||||||| ||||| | ||| | || | || Sbjct 505583 AGGACGAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCAAGGGTTCGGCCGTCT 505524 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||||||||| || |||||||| || |||||||| | || | |||||||| || Sbjct 505523 TCGAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCC 505464 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || ||| || || || | ||||| || | |||||| |||| || || Sbjct 505463 TGAATCTTTGACTTAAC--AT--TGTCGATGGTATCGGACGACTCGACCTCAAGAGTGAT 505408 Query 34942 GGTCTTTCCCGTGAGGGTCTTTAC 34965 |||||| || ||||||||||| || Sbjct 505407 GGTCTTGCCAGTGAGGGTCTTGAC 505384 >seq146 Length=515804 Score = 98.7 bits (108), Expect = 6e-16 Identities = 134/185 (72%), Gaps = 8/185 (4%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || || | || |||| || || ||||| || ||||||| Sbjct 85984 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 86043 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||||||| || ||||| | || | ||||||||||| | || || ||||| || Sbjct 86044 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT- 86100 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| || || |||||| || | ||| |||||||| ||||| |||||||| Sbjct 86101 -TGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTC 86159 Query 34964 ACAAA 34968 || || Sbjct 86160 ACGAA 86164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325689322822244