Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F001931975.2_202017-02-15] 876 sequences; 51,318,644 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq13 241 2e-58 seq859 141 1e-28 seq19 87.8 2e-12 >seq13 Length=1543628 Score = 241 bits (266), Expect = 2e-58 Identities = 1147/1788 (64%), Gaps = 51/1788 (3%) Strand=Plus/Plus Query 110324 TCAAGACTGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTC 110383 |||| | |||||||||| || || |||| || || || |||||||| || ||| Sbjct 382735 TCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTACGAAGGTAGTACATGCCAGTC 382794 Query 110384 TTGAGTCCTTGTTTCCATGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACT 110442 ||||| || | ||||| || | || | |||||| | || |||| |||||| || Sbjct 382795 TTGAGGCCAAGCTTCCA-GCCTGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTC 382853 Query 110443 TTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCC 110500 | |||| || ||||| ||| |||| | ||||||||| || || | || ||| Sbjct 382854 CTTCATGTGGATGTTCAGTGACTGGGACT--GATCAATGAAGGCACCTCGATCAGCAGCC 382911 Query 110501 ATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCA 110560 || | || ||| | | ||| |||||||| || ||| ||| ||||| ||| Sbjct 382912 ATCTGAACGACTTGGCGCTGAGAAATCTCCCAAACGGTCTTATACAGAGCCTTGACATCG 382971 Query 110561 TCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATA 110620 | ||||| | | || |||||||||||||| | | | ||| | | ||||||| Sbjct 382972 GCAGGGATGTTGGGAATGTTCTGGATGGAACCATTCTCAGCAATGATGCGGTTCTTCATA 383031 Query 110621 TCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACA 110680 | | |||||| ||||| || | ||||| |||| || |||||||| Sbjct 383032 GCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGG 383091 Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740 |||||||| ||||| | || |||||||||| | ||||| || || ||||| || Sbjct 383092 AACTCACCAGCGAGAACACGTCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCG 383151 Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800 || || |||| || || | ||| ||| || ||||| || || | | ||||||||| Sbjct 383152 TTGTTGCCCAGAATCTGGGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTGTTA 383211 Query 110801 CGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACA---TCCCAGTCGTAGTTG--AGCT 110855 || | || | ||||| ||||| ||| | |||||||| || | || Sbjct 383212 CGGATGCCGTGTGTCTTGAC---TTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGAG 383268 Query 110856 TGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAA 110915 || || || |||| ||||||| ||||| || | || | || ||||| ||||| | | Sbjct 383269 -GGCTTGACGTTCC-ACATGTCGAACTGGAGGATACCCTCAGAGGCGGGGGAACCTTTGA 383326 Query 110916 AGGTTTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGA 110974 |||| |||| ||| | | | ||||| | ||| | || ||||| ||||| Sbjct 383327 AGGTGGAGTAGGGACCCTCCTCCTTAGCCAGCTGCACGGAG-GCAGTCAGGGCAGCGTGG 383385 Query 110975 TACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG 111034 || ||||| || ||||| | || | ||| || || ||| || || | | Sbjct 383386 TAAATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGCATG 383445 Query 111035 CGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCG 111093 || || | || || |||| || || || |||||||| | |||||| |||| ||| || Sbjct 383446 CG-CAGAGCAAGGAAAGCATCGGCAAGGCCCTGAACACCAAGACCAATGGGTCGGTGGCG 383504 Query 111094 CATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAG 111153 ||| ||| || || || || || || || || || |||| ||| || Sbjct 383505 CATGTTACTGTTGCGAGCCTCCTGGACAGGGTAGTGGTTCACATCGATGATCTTGTTCAG 383564 Query 111154 ATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCATAATCAAAAGTGCGAGTCT 111212 || |||||| || ||| | || || || || | | || | || || || Sbjct 383565 GTTGCGAATAACAACCTGACTGACCTTGTGCAACTTCTTGA-AGTCGTA---GCAAGCCT 383620 Query 111213 CTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 111269 | || | ||| | || || || | || || | ||||| ||||| ||| | Sbjct 383621 CATCGTAGTTGATGAAAGAGGGCAGAGCCAGAGAGGCAAGGTTGCAGACAGCGACCTCGT 383680 Query 111270 CCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAAT 111329 | | |||||| | |||||| || || | |||||| || || || || | | Sbjct 383681 CAGGGGCACAGTACTCAATAATTTCAGTGCACAGGTTGGAGCTTCGGATGGTACCGAGGT 383740 Query 111330 TCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 111389 |||||||||| ||||| |||||| |||||||||||||||||| | || | || |||| Sbjct 383741 TCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCT 383800 Query 111390 CCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGC-TGGTACAATGGCGTTGGC 111447 | ||||| | | ||||| || | ||||| || | | | || || | || | | Sbjct 383801 CAGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCCTTGATAGTCTTGC---GAC 383857 Query 111448 CCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGG 111506 || | |||||| |||||||||| ||| || || || |||||||| || ||||| Sbjct 383858 CCTTGCCCTCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTCGG 383917 Query 111507 AGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCT 111566 ||| || || || || || || | || | ||| | || | ||||| |||| Sbjct 383918 CGAGGCCAGGGCACTCGTTGGGGCACATCAGCGTCCAGTCGCCGTTCTTTTCAACACGCT 383977 Query 111567 TCATGAAAAGGTCTGGAATCCACAGG--GATGAAAAGAGATCTC-TACACCGAGCCTCTT 111623 |||||||||| || || ||||| ||| || |||| || || | ||| || |||| | Sbjct 383978 TCATGAAAAGATCAGGGATCCAAAGGGCGAGGAAA--AGGTCACGGGCACGGA-CCTCCT 384034 Query 111624 CGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAA 111683 | | ||| ||||| || | ||||||||||| | || ||| | |||||| ||||| | Sbjct 384035 CTTTACCGTGGTTCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGA 384094 Query 111684 GATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGG 111740 | |||| || | || || ||| ||| | || | |||||||| || ||| Sbjct 384095 GGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATAGCGAGCAGTGT 384154 Query 111741 CGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-AT 111798 ||| || || |||||||| |||| || ||| | ||| ||| || || || ||| | Sbjct 384155 TGTTGAAGACACGAAGCATAGGAACAACACCGTTCGATGTACCGTTGGTACCGGCGATGT 384214 Query 111799 ACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGA 111858 | ||| | | || | | | || | || || |||||||| |||||| ||| || Sbjct 384215 AGGAG--CCAGTAGCACGGATACGGTGCACGTTCAGACCAATACCACCAGCCATCTTGGA 384272 Query 111859 GATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGC 111918 ||| ||||| | | ||||| | ||||| || | || ||| ||||| | | Sbjct 384273 GATCATGGCACAGGTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATC 384332 Query 111919 GATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGT 111978 | | ||||||| |||| || || || || || || |||||||| || || | Sbjct 384333 AACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTGCCGGCGTTGAAGAGCGTGGGAGA 384392 Query 111979 TGCGTGAATGAACA--TACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATG 112036 || || |||| | | || ||||||| || ||||||||||||||| || || Sbjct 384393 GGCATGTGTGAAGAATTTGCT--GGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATA 384450 Query 112037 TCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGG 112084 || || || || || | | || ||||||| ||||| ||| ||| Sbjct 384451 TCATCACCCCAAATACCAACAGACACACGCATGATCATGTGCTGAGGG 384498 >seq859 Length=812484 Score = 141 bits (156), Expect = 1e-28 Identities = 532/819 (65%), Gaps = 29/819 (4%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| | || |||||||| |||||||||||||| ||| ||||| ||||| ||||| Sbjct 626414 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCATG 626355 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCC-CAACTTGTTTGAGG 122484 ||||| || || || | || || ||| | | || || | | || ||| Sbjct 626354 AAGTCGAAGGGGTTGGTGGCCTTGTAAACCTTCTCGTTGCCAAGCGCGACA------AGG 626301 Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGG 122544 |||||||| | || |||||||||||| ||| ||||||||||| |||| ||| Sbjct 626300 AGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGG 626241 Query 122545 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 122604 ||| || || || || || |||| | | |||||| || || || | | ||| Sbjct 626240 GCACAAGGAAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTAATGATA 626181 Query 122605 GCGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGCA 122661 | ||||| | | | ||| | | || | || | || ||| || |||| Sbjct 626180 TCCTGGATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCA 626124 Query 122662 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGC 122721 || || ||| ||||||||||| || || || || || || |||||| ||||| ||| Sbjct 626123 AAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGC 626064 Query 122722 ATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCC 122781 |||||||| |||||||| | ||| | |||| | ||| | || ||||||||||||| Sbjct 626063 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGCACCACTGAAGAAGATACCC 626004 Query 122782 TCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCA 122840 || ||| || || |||| || || | ||| |||||| ||| ||| | | | ||| Sbjct 626003 TCAACAGCAGCGAAAGCAACGAGACGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCA 625945 Query 122841 TTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAA 122900 | || ||||| | |||||||| || || || | || | ||||| | ||| | Sbjct 625944 TCGGATGGCCCAGTCGGCCTTCTTTCGGATGCAGGGGATGGTCTCAATGGCGTTAAAGAG 625885 Query 122901 CT-GCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGC 122959 | | ||| | || ||||| ||||| ||||||| | || || || ||| Sbjct 625884 GTAGGTTC-GCTGAGCGGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCGG 625826 Query 122960 CATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGA 123018 || | | | ||| ||| | || | ||||||| | || || ||| ||||| Sbjct 625825 AGTGGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCAACGAGCCTCGGGGATCTGG 625767 Query 123019 ACCTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 123077 ||||| || | ||| | | || ||||| ||||| ||||| ||| |||| || Sbjct 625766 ACCTC-GCCACTGAATCGCTCGACGAGGTTCTCGTTGACAATACCATCAGACGCAGCGAA 625708 Query 123078 GAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTC 123134 ||| || ||||||| | ||| || |||| || ||| || | |||||||| Sbjct 625707 GAAAGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAGTC 625648 Query 123135 GTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 | ||||| ||||| | ||||| || || |||||||| Sbjct 625647 ATGGAGATCCTTGGAAAGATCAATCTCCTCAGCAGTCCA 625609 >seq19 Length=1171679 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 164605 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 164664 |||| || |||| || ||||| ||||||||| |||||| ||| | || || | Sbjct 381803 ATGGACGCATTGCCCCTCGATCGGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 381862 Query 164665 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 164724 |||| || ||| |||| || || | ||||| ||| | |||||||| || || Sbjct 381863 GTGTCATCGATGCCGATTACCGCGGCCAGGTCAAGGTCCTGCTCTTCAACCATAACGAAT 381922 Query 164725 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 164777 ||||||||||||||| | || || ||||| || |||||||| || |||||| Sbjct 381923 CCGACTTTGAGGTAAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGC 381975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628025123049600