Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F001931975.2_202017-02-15] 876 sequences; 51,318,644 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq13 246 4e-60 seq859 150 2e-31 >seq13 Length=1543628 Score = 246 bits (272), Expect = 4e-60 Identities = 1140/1783 (64%), Gaps = 41/1783 (2%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| ||| | | |||||| || || || || || || Sbjct 384498 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATTTGGGGTGATGATATCGAGCGAGT 384439 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCAACCCTC 104338 ||||||||||||| || ||||||| || | | |||| || || | || || ||| Sbjct 384438 CTTGGAGACATACAACCTGATGTCC--AGCAAATTCTTCACACATGCCTCTCCCACGCTC 384381 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 ||||| || || || || |||||| |||| ||||||| | | | | ||||| Sbjct 384380 TTCAACGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAC 384321 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||| || | || ||||| | ||||| | | ||||| ||||| ||| |||| Sbjct 384320 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 384261 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 104516 || |||||||| || || | || | | | || | | ||| || ||| || | Sbjct 384260 GGTGGTATTGGTCTGAACGTGCACCGTATCCGTGCTACTGG--CTCCTACATCGCCGGTA 384203 Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576 | || ||| ||| | ||| || |||| |||||||| || || ||| ||| || |||| Sbjct 384202 CCAACGGTACATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCT 384143 Query 104577 ATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 |||| | || | ||| ||| || || | || |||| || ||||| |||| Sbjct 384142 ATGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGC 384083 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 || | ||| || | ||||||||||| | ||| ||||| ||| | ||||||| || Sbjct 384082 ACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGGTCCGTG 384023 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 ||| || || ||| ||| || ||||| || ||||| ||||||||| | ||||| ||| Sbjct 384022 CCCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAAGA 383963 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 ||| | ||| | || | || || || || ||||| ||| |||| | || | Sbjct 383962 ACGGCGACTGGACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGAG 383903 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGT 104871 ||||||| || || || ||| ||||||||| |||| ||| | | | | || ||| | Sbjct 383902 AGGAGTTCGAGGCTCTGTACGAAAAGTACGA-GAAGGAGGGCAAGGGTC-GCAAGACTAT 383845 Query 104872 GCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 ||| | | ||| | || ||||| || | || || ||||| || | |||| Sbjct 383844 CAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCCATT 383785 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||||| ||||| || ||||| |||| ||||| || |||||||| | ||| ||| Sbjct 383784 CATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTACCATCCG 383725 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 || ||||| || || || ||||| | || | | | || ||| ||||| || Sbjct 383724 AAGCTCCAACCTGTGCACTGAAATTATTGAGTACTGTGCCCCTGACGAGGTCGCTGTCTG 383665 Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT----- 105106 ||||| || || | ||||| ||| | | | || || || | || || Sbjct 383664 CAACCTTGCCTCTCTGGCTCTGCCC---TCT-TTCAT-CAACTACGATGAGGCTTGCTAC 383610 Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166 || | | || | ||| | || | | ||| | ||||| |||| | || Sbjct 383609 GACTTCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATC 383550 Query 105167 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 ||| || ||||| || || ||||| || ||| ||| | ||||| || ||| Sbjct 383549 GATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGACCCATT 383490 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTC 105285 ||||| ||||||||||| || || |||| ||| || || || ||| | || || || Sbjct 383489 GGTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCTTGCTCTG-CGCATGCCCTTCGAGTC 383431 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345 ||| || || |||| || || || |||||||| || ||||| || || Sbjct 383430 ACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTACCACGCTGCCCTGAC 383371 Query 105346 GGC--GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCA 105403 || || | || |||| ||| || ||||| || ||||| | ||||| || Sbjct 383370 TGCCTCCGTGC--AGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAAGGTTCCCCC 383313 Query 105404 GCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGAC 105463 || || | || | || || || || |||||| | | || || | || ||| Sbjct 383312 GCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTGGGAC 383253 Query 105464 TGGGAAGCTC-TCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGG 105521 ||||| ||| || || | | | ||||| | || | ||||||||||| ||| | | Sbjct 383252 TGGGAGACTCTTCGAGAGGAAG--TCAAGACACACGGCATCCGTAACAGTCTGCTCCTTG 383195 Query 105522 CTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 105581 |||| ||||| || ||| ||| | || || |||| || || || ||||| || |||| Sbjct 383194 CTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCT 383135 Query 105582 ACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGC 105641 |||| | |||||||| | || | ||||| || ||||| | |||||||| Sbjct 383134 ACACCTCCAACATCTACCAACGACGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCT 383075 Query 105642 ATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGG 105701 || | | ||||| || || ||||| |||||| | | ||||||| | | ||| Sbjct 383074 GGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCGCATCA 383015 Query 105702 TGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGT 105761 | | | ||||||||| || || ||| | || || || | ||| ||| Sbjct 383014 TTGCTGAGAATGGTTCCATCCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTCTGT 382955 Query 105762 ACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTC 105821 | || |||||||| || | | ||| || | ||||| || ||||| ||| Sbjct 382954 ATAAGACCGTTTGGGAGATTTCTCAGCGCCAAGTCGTTCAGATGGCTGCTGATCGAGGTG 382895 Query 105822 GCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTCCAA 105879 ||||||||||| |||| ||| |||| || |||| | || |||||| ||| Sbjct 382894 CCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGATGGGCAA 382837 Query 105880 GCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACC 105938 | || | ||||||| | | || | |||||| || ||||| || || ||||| |||| Sbjct 382836 GATCACCAGTATGCAC-TTTGCAGGCTGGAAGCTTGGCCTCAAGACTGGCATGTACTACC 382778 Query 105939 TCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 105981 | || | |||| || || |||||||||| | |||| Sbjct 382777 TTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 382735 >seq859 Length=812484 Score = 150 bits (166), Expect = 2e-31 Identities = 208/286 (73%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 94672 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCA 94730 ||||| |||| || || ||||| ||| || ||| | | |||||| | ||||| | Sbjct 625843 CTCATTGACACCTACATCAAGGAGCCCGCTCAGC-GAACCTACCTCTTTAACGCCATTGA 625901 Query 94731 AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGT 94789 || | || || || | |||||| || || ||||| || ||| | | | || | Sbjct 625902 GACCATCCCCTGCATCCGAAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGATAAGGA 625961 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | | | ||||||| |||| ||| | || || || ||||||||||||||||||| || Sbjct 625962 CTCCT-CCTTTGCCCAGCGTCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTG 626020 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || ||||| | |||| | |||||||||||||| ||||||||||| ||||| ||||| Sbjct 626021 GTGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCT 626080 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||||| ||||||||||| ||||| || ||| || ||||| Sbjct 626081 CCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTTGC 626126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583254413294240