Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F001931975.2_202017-02-15] 876 sequences; 51,318,644 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq437 143 2e-29 seq426 143 2e-29 seq146 123 2e-23 >seq437 Length=608608 Score = 143 bits (158), Expect = 2e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||| || || ||| ||||||||| ||||| |||||| Sbjct 261036 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 260977 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||| || || || || ||||| ||||| | ||| Sbjct 260976 AGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGGGGG 260917 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | |||||| |||||||| Sbjct 260916 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTCCAC 260858 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||| | || ||||| || ||||| || ||||| |||||||||||||| || Sbjct 260857 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 260807 >seq426 Length=1359975 Score = 143 bits (158), Expect = 2e-29 Identities = 186/251 (74%), Gaps = 7/251 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || || ||||||||||||||| || || ||| Sbjct 505316 CCACCACGGAGGCGGAGAACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAG 505257 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || ||||||||||||||||| |||| ||| || ||||| | |||| Sbjct 505256 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAAGCGTTGCTGGTCAGGGGGA 505197 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || |||||||||| ||| | || | ||| || | || | ||||||| ||||| Sbjct 505196 ATGCCCTCCTTGTCC-TGAATCTTGGACTTGACATTGTCG--ATAGTGTCGGAGGACTCA 505140 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCGATG 41872 ||||| | || || || || || |||| ||||| ||||| ||||||||| | || | Sbjct 505139 ACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATGATGGCGGT- 505081 Query 41873 GATCTCGCGCG 41883 ||||| |||| Sbjct 505080 GATCTGTCGCG 505070 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | || || || || || ||||||||| ||||| |||||| Sbjct 506055 GCCACCGCGAAGTCGGAGAACGAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGCT 505996 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||| | || || | |||||| || ||||| || || ||||| || || | ||| Sbjct 505995 CAAGGTGCGGCCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGG 505936 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCA 41813 || | ||||||||| || || ||||| || | || |||||| || ||||| | Sbjct 505935 AATACCCTCCTTGTCTTGAATCTTGCTCTTCA-CGTTGTCAATAGTGTCACTGGACTCGA 505877 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| || ||||||||||| Sbjct 505876 CCTCAAGGGTGATGGTCTTTCCGGTGAGTGTCTTCACAAAAATCTGCAT 505828 Score = 102 bits (112), Expect = 8e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || || |||||||||||||| ||||||| Sbjct 505598 CCACCACGGAGGCGGAGGACGAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCGGCA 505539 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| ||||| ||||| || || || ||||||||||| ||||| | || Sbjct 505538 AGGGTTCGGCCGTCTTCGAGTTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGG 505479 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||| ||| ||| | |||| | ||| | | | || ||| |||||| || Sbjct 505478 ATACCCTCCTTATCC-TGAATCTTTGACTTAACATTGTCGATGGTATCGGACGACTCGAC 505420 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||| | || || || || || || || ||||| |||| Sbjct 505419 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 505382 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || |||||||||||||| |||||||| Sbjct 505826 CCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAA 505767 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || || |||||||| ||||| || || |||||||| || | ||| Sbjct 505766 AGAGTTCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGAGGA 505707 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||||| | | | | || ||| ||||| || Sbjct 505706 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTATCA-ATGGTATCGGATGACTCGAC 505648 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || || || ||||| ||||| || ||||| Sbjct 505647 TTCCAGAGTAATGGTCTTTCCAGTGAGGGTCTTGACGAAGATTTGCAT 505600 >seq146 Length=515804 Score = 123 bits (136), Expect = 2e-23 Identities = 139/184 (76%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||||||||| || || | || || |||||||| || ||||| | Sbjct 85984 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 86043 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 |||| ||||||||||||| ||||| || |||||||||| ||| || ||| || | Sbjct 86044 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 86103 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | ||||| ||||| ||||| | || || || || |||||||| ||||| || Sbjct 86104 CG--ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 86161 Query 41851 GAAA 41854 |||| Sbjct 86162 GAAA 86165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462298937771200