Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq10 113 5e-20 >seq10 Length=5928648 Score = 113 bits (124), Expect = 5e-20 Identities = 351/534 (66%), Gaps = 26/534 (5%) Strand=Plus/Plus Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065 |||||||| || |||| |||||||| || || ||||| | ||| || || | || Sbjct 4470700 TCGTTAGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCA 4470759 Query 17066 AACG-ACC-CAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGT 17123 || | ||| | ||||| | ||||||||||||| || || || | | || | ||| Sbjct 4470760 AAGGCACCGCTGAAAA--AGATACCCTCGACGGCAGCGAAGGCAACGAGACGCTGGGCAA 4470817 Query 17124 ACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAA 17182 | | | ||| |||| | |||||| |||| ||||| || |||| |||||| Sbjct 4470818 AGGAAGAGTCCTTGTCCTGGATCCATCGGATGGCCCAGTCGGCCTTCTTGCGG-ATGCAA 4470876 Query 17183 TCCATCGTTTCTATGGCCTTAAA----TAATTTCTCTTTTTCCTGTAGG-TCGATTATAT 17237 || || || ||||| || || || ||| || | ||| || | |||| Sbjct 4470877 GGGATGGTCTCAATGGCGTTGAAGAGGTAGGTTCGCTGG-----GAAGGCTCCTTGATAT 4470931 Query 17238 ACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATC 17297 | || || ||||| ||| ||| | |||||||| ||||||||||| ||||| || | Sbjct 4470932 AGGTGTCAATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAAC 4470991 Query 17298 CGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTT 17357 |||| |||||||| || || | || || || || || |||||| || | || || | Sbjct 4470992 CGTAGAAGCATCGAGCCTCGGGGATCTGGACCTCGCCGCTGAATCGCTCAACAAGGTTCT 4471051 Query 17358 CGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTT 17417 |||| ||||||||||| ||||| || || || | || || ||||| | | | Sbjct 4471052 CGTTGACGATGCCGTCAGAGGCGGCAAAGAAGGCAAGAATGTGAGAGATGAAGAACTGCT 4471111 Query 17418 CGTCCGGTGTAAGAACGCG------CCAGTCCTTTAAATCTTTGGATATATCCACTTCTT 17471 |||| | || || ||| |||||| | | ||| ||||| | ||| | || | Sbjct 4471112 CGTCGGAGGTCAG---GCGGTTGTTCCAGTCGTGGAGATCCTTGGACAGATCAATCTCCT 4471168 Query 17472 CGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGT 17525 | | ||||| ||| ||| | ||||| || ||||| | ||| || | ||||| Sbjct 4471169 CCGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTGCCAGATCT-ATTGT 4471221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545490021560