Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 163 3e-35 >seq1 Length=6466812 Score = 163 bits (180), Expect = 3e-35 Identities = 412/628 (66%), Gaps = 45/628 (7%) Strand=Plus/Minus Query 145681 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCC 145740 || |||| || ||||||| || |||||||| ||||| |||| |||||| ||| | Sbjct 3745547 TTGAGGGCTTCGACGTGGTCAAGATAGACGTGTGCGTCGCCCATGACGTGAGTGAGGCTG 3745488 Query 145741 CCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATG 145800 || || | | | || || || | ||||| ||||||| | ||||||||| ||| Sbjct 3745487 CCAGGTACCAACTCGCAGACATGCGCCATCATGTGTGTCAGCAATGCGTAGCTGGCAATG 3745428 Query 145801 TTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCT-- 145858 ||||| || || || || |||||||| | || |||||||| ||||| ||| || | Sbjct 3745427 TTGAATGGAACACCTAGGCCCATGTCGCAAGATCGCTGGTAGAGCTGACAGTGTAGATGG 3745368 Query 145859 CCC----------------------CGCCC---------------GCCACGTAGAACTGG 145881 ||| || || | ||||||||| ||| Sbjct 3745367 CCCTGGGGCTTGGTCTCGGGGTCGTCGTCCTTTCGTCGGGGGTATGACACGTAGAATTGG 3745308 Query 145882 CACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTG 145941 | | |||||| || || ||| |||| |||||| || || |||||||||| Sbjct 3745307 GCAAACATGTGGCACGGTGGGAGGACCATCTTCTTCAGGTCGGCGGGATTCCAGGCGGAA 3745248 Query 145942 AGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTG 146000 |||| || | | | || | ||||| | | || || | || |||||| Sbjct 3745247 AGGATCAGACGAC-GATCATATGGGTTGGTTCGCAGCTTGTGAATAATCTCGGCGAGCTG 3745189 Query 146001 GTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCT 146060 ||| || ||||| ||| ||| || ||||||| ||| |||||| | || || ||||||| Sbjct 3745188 GTCGACTCCCTGGCCCGTGTAGTCCGTCTTGGCGTCGACGTACTCTGCGCCAAAGTGCCG 3745129 Query 146061 CCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCG 146120 ||||||||| ||||| ||||| || ||||| ||| ||| | ||| || ||| Sbjct 3745128 CCACTGGAAGCCGTACACGGGGCCAAGGTCGCCGACCTCGCGGTGGTTGAGGCCGAGGTT 3745069 Query 146121 GGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGC 146178 ||||||| || ||||| || ||| ||||||||||||||| ||| |||||| ||| || Sbjct 3745068 ATCGAGGAACTCGCGGGATCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAG-GC 3745010 Query 146179 TCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAG 146238 | ||||| ||| ||| || ||||||||| ||||| ||| ||| | | Sbjct 3745009 T-GGTGGAGGATGTGTTGCCCTCGACGAACCAGAGGAGCTCGGCGATGACAGCGCGGGTA 3744951 Query 146239 AAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 ||||| | ||||||||| || ||||||| Sbjct 3744950 AAGACGCGCTTGGTGGTGAGGAGGGGGA 3744923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076674608680