Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq10 150 3e-31 >seq10 Length=5928648 Score = 150 bits (166), Expect = 3e-31 Identities = 374/560 (67%), Gaps = 12/560 (2%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||| |||||||| || | | |||| ||||| || || || || Sbjct 4470658 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGATATTAACTCGTTAGAGAAGGTCAGA 4470717 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATG-ACC-CAGAAAAGA 50077 |||||||| || |||||||| || ||||| || ||||| ||||| | ||| | ||||| Sbjct 4470718 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAAA-- 4470775 Query 50078 AGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA---ACTGGCGCTGTCAT 50134 |||| || || || || || |||||||| || | || || | | | | |||| | Sbjct 4470776 AGATACCCTCGACGGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAAGAGTCCTTGTCCT 4470835 Query 50135 GTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 50193 | ||||| | || ||||| ||||||||||| | ||||| || || || ||||| Sbjct 4470836 GGATCCATCGGATG-GCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCG 4470894 Query 50194 TTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 50253 || ||||| ||| || | | || || | ||| || || || | || || Sbjct 4470895 TTGAAGAGGTAGGTTCGCTGGGAAGGCTCCTTGATATAGGTGTCAATGAGCAGGGAGTAG 4470954 Query 50254 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 50313 | || || || ||||| || || ||||| || |||||||| |||| |||||||| Sbjct 4470955 GTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGG 4471014 Query 50314 ATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCT 50373 ||||| || || | ||||| ||| | | || || || || || |||||| ||| Sbjct 4471015 ATCTGGACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCG 4471074 Query 50374 GCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTC 50430 ||||| || || | | || || || | |||| || || | | || ||| Sbjct 4471075 GCAAAGAAGGCAAGAATGTGAGAGATGAAGAACTGCTCGTCGGAGGTCAGGCGGTTGTTC 4471134 Query 50431 CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 50490 || || | || ||| || || | ||| | || ||| | ||||| || || ||||| ||| Sbjct 4471135 CAGTCGTGGAGATCCTTGGACAGATCAATCTCCTCCGCAGTCCAGAAAGAGGCCTCGGCC 4471194 Query 50491 TTTTTATACATATTCCAGAT 50510 || || ||||| | |||||| Sbjct 4471195 TTCTTGTACATCTGCCAGAT 4471214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268647367880