Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq10 253 3e-62 seq11 149 9e-31 >seq10 Length=5928648 Score = 253 bits (280), Expect = 3e-62 Identities = 574/849 (68%), Gaps = 33/849 (4%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| ||||||| || ||||| | || ||| | |||||| Sbjct 4471214 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCGGAGGAGATTGATCTG 4471155 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGAC-TGAAACTGAGCGAGAGTTTATATC 125137 |||||||| || |||| ||| | | || |||| | || |||| || || || Sbjct 4471154 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACCTCCGAC-GAGCAGTTCTTCATCTC 4471096 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACAC 125196 |||||| | ||||||||||||| ||| || || ||||||||||| || || ||||| | Sbjct 4471095 TCACATTCTTGCCTTCTTTGCCGCCTCTGACGGCATCGTCAACGAGAACCTTGTTGAG-C 4471037 Query 125197 GATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATG 125255 ||||| ||| | || || |||| ||| ||||| ||||| ||||| |||||| Sbjct 4471036 GATTCAGCGGCGAGGTCCAGATCCCCGAGGC-TCGATGCTTCTACGGTTTCCAGATCATG 4470978 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315 || |||||| | ||||| || | ||||| || ||||||| || || || || Sbjct 4470977 ATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGACACCTATATCAAGGAGCCT 4470918 Query 125316 ---CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 || || | || ||||| ||||| || || || | || | || || || ||| Sbjct 4470917 TCCCAGCGAACCTAC---CTCTTCAACGCCATTGAGACCATCCCTTGCATCCGCAAGAAG 4470861 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 || | |||| || || |||||| | ||| | | ||||| | ||| | | || || Sbjct 4470860 GCCGACTGGGCCATCCGATGGATCCAGGACAAGGACTCTTCCTTTGCCCAGCGTCTCGTT 4470801 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || ||||| ||||| ||||| ||||| || ||| ||||| ||||||| |||||| Sbjct 4470800 GCCTTCGCTGCCGTCGAGGGTATCTTTTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTC 4470741 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| || ||||||||||| ||||| | ||||||||| |||||||| || ||| Sbjct 4470740 AAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCTAACGAGTTAATATCTCGTGATGAG 4470681 Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGA 125612 || || ||| ||||||||| || || | ||| | | | || || | Sbjct 4470680 GGTCTTCACACCGACTTTGCCTGCCTCCT------CCACT---CCCACCTCAAGGGCCGT 4470630 Query 125613 TCCAGCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAGGATAGAACAAGAG 125669 | ||| | |||||||| |||| | || |||||||| | || || || ||| Sbjct 4470629 GCTAGC---AAGCAGGTCATCCAGGACATCATCACTGATGCCGTCACCATTGAGCAGGAG 4470573 Query 125670 TTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAG 125729 || || || || | || || | | | | ||||||||| | | || ||| || Sbjct 4470572 TTCCTGACTGAGGCTCTCCCCTGCGCCCTTCTCGGCATGAACGCCGATCTCATGAAGCAG 4470513 Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTAC 125786 ||||| ||||| || || || ||||| ||| || | ||| || ||| | ||| Sbjct 4470512 TACATCGAGTTCGTCGCTGACCGTCTTCTGGTCG---CCCTCGGCAACGAGAAGGTCTAC 4470456 Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846 || || || ||||| || |||||| | ||| || || | || ||||||||||| Sbjct 4470455 AAGTCCGCCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGGTGGCAAGACCAACTTC 4470396 Query 125847 TTCGAGAAG 125855 ||||||||| Sbjct 4470395 TTCGAGAAG 4470387 >seq11 Length=4934405 Score = 149 bits (164), Expect = 9e-31 Identities = 313/463 (68%), Gaps = 14/463 (3%) Strand=Plus/Minus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 |||||||| ||||| |||||||| || || || || | ||| ||||| | || || Sbjct 3280874 CGATACGTCGATCAGGGTGGCAATAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCC 3280815 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| || || ||||| || | || ||||||| ||| ||| || |||| Sbjct 3280814 TGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTT 3280755 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC--- 97040 || || | ||| |||| || |||||| | || ||| | ||||||||||| ||| Sbjct 3280754 CGCGCTCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGAG 3280695 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 || |||||| |||||| || ||||| ||| || || ||||| || |||| ||| Sbjct 3280694 AAGAACGGTG---ACTGGACTCTCATGTGTCCCAACGAGTGTCCCGGCCTCGCCGACTGC 3280638 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGA 97160 | || || ||||| ||||| |||| | || | ||| ||| | || | | Sbjct 3280637 TACGGTGAGGAGTTCGAGGCTCTGTACGAGAAGTATG----AGAAGGCTGGTAAGGGTCG 3280582 Query 97161 CGAGTCGATGCA---CGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGG 97216 | || | ||| | | |||| || ||| | |||||| | ||||||| |||||||| Sbjct 3280581 CAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAGACTGAGACTGG 3280522 Query 97217 AACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGG 97276 | || | ||| |||||||||||| | || ||||| |||||||| || | || Sbjct 3280521 CAACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGG 3280462 Query 97277 CACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 ||||| ||||||| || ||||| || ||| | |||||| Sbjct 3280461 TACCATTCGCAGCTCCAACCTTTGCACCGAGATTATCGAGTAC 3280419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059042524920