Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq13 96.9 3e-15 seq12 96.9 3e-15 >seq13 Length=4347623 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||| | ||||| || |||||||| || | ||| || || | || || || |||| Sbjct 2712232 CACAAGGTGCAGGGTCGATTCCTTCTGAATGTTGTAGTCAG--AGAGGGTGCGACCATCC 2712175 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||||||| || || ||||||| | || ||||| || || || ||||| || ||||| Sbjct 2712174 TCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC 2712115 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGG 94973 | ||| || | ||| || | | ||| || || ||| ||||| || | ||||| | Sbjct 2712114 TGAATCTTGGACTTCACATTATCAATAGTATC-GC-TGGACTCGACCTCCAGAGTGATTG 2712057 Query 94974 TTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | |||||||| ||||| || |||||||||||||| Sbjct 2712056 TCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 2712023 >seq12 Length=8749402 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 94817 TCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAG 94876 ||||| || | ||| || ||||||| ||| | |||||| ||||| || || ||||| Sbjct 4927398 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 4927339 Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936 || | || ||||| || || || || || || ||||| | || || | ||||||| | Sbjct 4927338 ATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 4927279 Query 94937 CCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACA 94996 ||| ||||| | || || |||| |||||||| || || ||||| || || || Sbjct 4927278 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTCCCCGTAAGGGTCTTGACG 4927219 Query 94997 AAGATCTGCAT 95007 ||||||||||| Sbjct 4927218 AAGATCTGCAT 4927208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291104738120