Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq10 149 8e-31 >seq10 Length=5928648 Score = 149 bits (164), Expect = 8e-31 Identities = 370/558 (66%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || || || ||| ||| |||||||| || | | |||| ||||| || || || || Sbjct 4470658 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGATATTAACTCGTTAGAGAAGGTCAGA 4470717 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| || |||||||| || ||||| || |||||||| || | || || ||| Sbjct 4470718 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAAAAG 4470777 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33480 || || || || ||||| ||||||| || | || || | | | | |||| || Sbjct 4470778 ATACCCTCGACGGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAAGAGTCCTTGTCCTGG 4470837 Query 33481 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 ||||| | || ||||| ||||||||||| | ||||| || || || ||||| || Sbjct 4470838 ATCCATCGGATG-GCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTT 4470896 Query 33540 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33599 ||||| ||| || | | || || | ||| || || || | || || | Sbjct 4470897 GAAGAGGTAGGTTCGCTGGGAAGGCTCCTTGATATAGGTGTCAATGAGCAGGGAGTAGGT 4470956 Query 33600 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33659 || || || ||||| || || ||||| || |||||||| |||| |||||||| || Sbjct 4470957 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGAT 4471016 Query 33660 CTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGC 33719 ||| || || | ||||| || | | || || || || || |||||| ||| || Sbjct 4471017 CTGGACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCGGC 4471076 Query 33720 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCA 33776 ||| || || | | || || || | | ||||| | || | | || ||||| Sbjct 4471077 AAAGAAGGCAAGAATGTGAGAGATGAAGAACTGCTCGTCGGAGGTCAGGCGGTTGTTCCA 4471136 Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836 || | || ||| || || | ||| | || ||| | ||||| || || ||||| ||||| Sbjct 4471137 GTCGTGGAGATCCTTGGACAGATCAATCTCCTCCGCAGTCCAGAAAGAGGCCTCGGCCTT 4471196 Query 33837 TTTATACATGTTCCAGAT 33854 || ||||| | |||||| Sbjct 4471197 CTTGTACATCTGCCAGAT 4471214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947067623720