Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq11 425 1e-113 seq10 87.8 5e-12 >seq11 Length=4934405 Score = 425 bits (470), Expect = 1e-113 Identities = 1082/1629 (66%), Gaps = 32/1629 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||||| | || || | | |||||| || || | | || ||| | || || Sbjct 3281132 TTCACTCACGCCTCCCCCACCCTCTTCAATGCGGGTACCCCCCAGCCCCAGCTCTCCTCA 3281073 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| ||| | | |||||||| || || |||||||| | ||| || || |||| | Sbjct 3281072 TGCTTCCTTGTCGACATGAAGGAGGACAGTATTGAGGGTATTTATGATACTCTCAAGACT 3281013 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | |||||||||| || || || ||||| | | || | ||| | ||||| Sbjct 3281012 TGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCCTGAACG-TGCACCGAATCCGTGC 3280954 Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 || | |||||| ||| || || ||| || || | |||||||| | Sbjct 3280953 CACTGGTTC-TTACATCGCCGGTACCAACGGTACCTCCAACGGTGTTACCCCCATGCTCC 3280895 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 |||| || |||| ||||| | |||||||| |||||||| ||||| || || | Sbjct 3280894 GTGTCTTCAACAACACTGCCCGATACGTCGATCAGGGTGGCAATAAGCGACCTGGTGCCT 3280835 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 |||| || || || ||||| || || ||| | |||||||| ||||| || || || | Sbjct 3280834 TTGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGA 3280775 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || || ||||| | || || || || |||||| || || ||| || | || | Sbjct 3280774 ACCACGGCAAGGAGGAGGTTCGCGCTCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATC 3280715 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATG 364022 || |||||||| || ||| | | | | | ||| | ||| | || || |||| || Sbjct 3280714 TCTTCATGAAGCGTGTCGAG--AAGAACGGTGACTGGACTCTCATGTGTCCCAACGAGTG 3280657 Query 364023 TCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATC 364082 ||| || || |||| | ||||| || | | ||||| ||||| |||||||| Sbjct 3280656 TCCCGGCCTCGCCGACTGCTACGGTGAGGAGTTCGAGGCTCTGTACGAGAAGTATGAGAA 3280597 Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142 || || |||| ||| ||||| || || |||||||| |||| ||||||| | || | Sbjct 3280596 GGCTGGTAAGGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGC 3280537 Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202 |||| |||||| || | |||| ||| | ||||| ||| |||||||||||| ||| Sbjct 3280536 TCAGACTGAGACTGGCAACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAA 3280477 Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACA 364261 |||| || |||||||||| |||| |||| | ||||| || ||||||||||| || ||| Sbjct 3280476 CCAGAAGAACCTTGGTACCATTC-GCAGCTCCAACCTTTGCACCGAGATTATCGAGTACT 3280418 Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA 364321 || || || ||| ||| || || |||||||| || |||| ||||| | || | | Sbjct 3280417 GTGCCCCTGATGAGGTTGCTGTCTGCAACCTTGCCTCCCTCGCCCTTCCCTCTTTCATCA 3280358 Query 364322 AAGATG----GTACT--TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTT 364375 | | | | || | |||| |||| | || | || || || | || | Sbjct 3280357 ACTACGACGAGGCCTGCTATGACTTCCAGAAGCTACACGAGGTCACACAGACTGTCGTTC 3280298 Query 364376 GCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCG 364430 |||| || ||| | | ||||| ||| | || || |||||||||| || ||| Sbjct 3280297 GCAACCTGAACAGGATCATCGATGTGAACCACTACCCCGTTCCTGAAGCTCGCAACAGC- 3280239 Query 364431 TTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTAT 364490 || ||||| || || || |||||| | ||||| ||||| || || || | ||| | Sbjct 3280238 ----AACATGCGACACCGGCCCATTGGTGTCGGTGTCCAGGGTCTTGCCGATGCTTTCCT 3280183 Query 364491 GATGCTC--AAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTT 364548 ||||| ||| | || || || ||||| ||||| | || || ||| |||||||| Sbjct 3280182 --TGCTCTGCGCATGCCTTTCGAGTCTCCTGAGGCTCGAGAGCTGAACAAGCAGATCTTT 3280125 Query 364549 GAAACAATGTATTTTGCCGCAATGACTGCTT-CGTGTGATTTGGCAAAAACCAAGGGAAA 364607 || || || || ||| || | ||||||| |||| | | || || |||| Sbjct 3280124 GAGACCATCTACCATGCTGCCCTCACTGCTTCCGTG-CAGCTCGCCAAGGAGGAGGGTCC 3280066 Query 364608 GTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAA 364667 ||||| || | |||| || || || |||| | ||||||| || | ||||| Sbjct 3280065 CTACTCCACCTTCAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAA 3280006 Query 364668 TGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGG 364727 || | ||| |||| || ||| ||||||| | || | | || ||| ||||||| Sbjct 3280005 AGTGAAGCCCTCTGACCTCTGGGACTGGGAGTCTCTCAGGGAGCAGGTCAAGGAGCATGG 3279946 Query 364728 TACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGG 364787 ||| |||||| || | || ||||||||||| ||| ||| | |||||||| || Sbjct 3279945 TACCCGCAACAGTCTGCTGCTTGCCCCCATGCCCACTGCTAGCACTTCGCAGATCCTGGG 3279886 Query 364788 AAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGG 364847 ||||||||||||||||| || | ||| |||| | ||| || || || || | || Sbjct 3279885 TAACAACGAGTGCTTCGAGCCTTATACCTCCAATATCTATCAGCGTCGTGTCCTCGCTGG 3279826 Query 364848 AGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGG 364907 || || | ||| ||||| | | |||||||||| ||| || |||||| Sbjct 3279825 CGAGTTCCAGGTCGTTAACCCCTGGTTGCTCAAGGATCTCGTCGATATGGGCCTGTGGTC 3279766 Query 364908 TGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATT 364967 ||| |||||||||| ||||| || | || ||||| | |||||||| || | Sbjct 3279765 TGATTCCATGAAGAACAGAATCATTGCTGAGAACGGTTCCATCCAGAACATCCCCAATAT 3279706 Query 364968 TCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCAT 365027 ||| | || | ||| || | ||||| ||||| ||||| |||||| ||| || | Sbjct 3279705 TCCCGCTGAGGTCAAGGCTCTCTACAAGACCGTTTGGGAGATTTCCCAGCGCCAGGTCGT 3279646 Query 365028 TGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCAT 365087 | ||||||||||| || ||||| || || |||| |||||| | ||| | ||| Sbjct 3279645 CCAGATGGCGGCCGACCGAGGTGCCTTCATTGATCAGTCCCAGTCTCTCAACATCCACAT 3279586 Query 365088 GACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCT 365147 || | || ||| | |||| | || |||||| || ||| ||||| |||||| Sbjct 3279585 GAAGGACCCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAGCTCGGTCT 3279526 Query 365148 TAAGACAGG 365156 |||||||| Sbjct 3279525 GAAGACAGG 3279517 >seq10 Length=5928648 Score = 87.8 bits (96), Expect = 5e-12 Identities = 145/209 (69%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAACGT 22494 || ||||| || ||||| | |||||| | |||| || ||| || || | ||| Sbjct 4470866 AAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAGGACTCTTCCTTTGCCCAGCGT 4470807 Query 22495 CTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTT 22554 || |||| || |||| || || || || || || || || ||| | | ||||| Sbjct 4470806 CTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTTTTCAGCGGTGCCTTTGCTTCCATCTTC 4470747 Query 22555 TGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGA 22614 ||||| || || |||| | ||||| ||||| || || || || |||||||| || Sbjct 4470746 TGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCTAACGAGTTAATATCTCGT 4470687 Query 22615 GATGAGGGTCTTCATACCGATTTTGCGTG 22643 |||||||||||||| ||||| ||||| || Sbjct 4470686 GATGAGGGTCTTCACACCGACTTTGCCTG 4470658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353316113294