Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq13 95.1 1e-14 seq12 84.2 2e-11 >seq13 Length=4347623 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || |||||||| || |||||||||||| | ||| | ||||| Sbjct 2712006 AGAACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCC 2711947 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | ||| ||||| || | ||||| ||||||||||| ||| | || || || || Sbjct 2711946 TCGAGTTGCTTGCCAGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATTCCTTCCTTATCC 2711887 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | | |||||| | | | |||||| | ||| || | ||||||||| Sbjct 2711886 TGAATCTTCGACTTCACGTTATCGATCGTGTCGGATGATTCCACCTCAAGGGTGATGGTC 2711827 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || ||||| || || ||||| Sbjct 2711826 TTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 2711795 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 ||||| || || ||||| || ||||||||||| | | ||| | ||||||| || Sbjct 2712225 TGCAGGGTCGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCATCCTCCAGCTGC 2712166 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| | ||||| ||||| ||||| || | ||||| ||||| ||| | Sbjct 2712165 TTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGAATCTTG 2712106 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | ||| |||| || ||| |||| ||||| || ||||| || Sbjct 2712105 GACTTCACATTATCAATAGTATCGCTGGACTCGACCTCCAGAGTGATTGTCTTTCCAGTG 2712046 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || |||||||| |||||||| Sbjct 2712045 AGAGTCTTGACAAAGATCTGCAT 2712023 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||||||||| | ||| | | ||||| | || Sbjct 2711769 TGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCAAGCTGC 2711710 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| | || || ||||| || || ||| | |||||| ||||| || ||| Sbjct 2711709 TTGCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGGATCTTT 2711650 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 | ||| || | | | | |||||| | |||| || | |||||| || || || | Sbjct 2711649 G--ACTTGACGTTGTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAG 2711592 Query 16911 TCAGCGTTTTGAC 16923 |||| || ||||| Sbjct 2711591 TCAGGGTCTTGAC 2711579 >seq12 Length=8749402 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||| |||||| || |||||||||||| || ||| | | ||| Sbjct 4927419 AGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 4927360 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| ||| | || || ||||| ||||| || | |||||| ||||| Sbjct 4927359 TCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 4927300 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | ||| || | | | | |||||| | |||| || | ||||||||| Sbjct 4927299 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTC 4927240 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || || || || ||||| || |||||||| ||| Sbjct 4927239 TTCCCCGTAAGGGTCTTGACGAAGATCTGCATCTTG 4927204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087916070830