Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 >seq13 Length=4347623 Score = 107 bits (118), Expect = 2e-18 Identities = 150/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | || || || ||||||| | || ||||| || || Sbjct 2711795 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTGGAATCATCC 2711854 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || ||||| | || | ||| || || ||||| ||||| ||||||| Sbjct 2711855 GACACGATCGA-TAACGTGAAGTCGAAGATTCAG-GATAAGGAAGGAATTCCTCCTGACC 2711912 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| |||| || || ||||| ||| | || || | || ||| | |||| |||| Sbjct 2711913 AACAGCGACTTATCTTCGCTGGCAAGCAACTCGAGGACGGCCGAACTCTCAGCGACTACA 2711972 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 | || || || || || || || || Sbjct 2711973 ACATCCAGAAGGAGTCTACTCTGCA 2711997 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/193 (72%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 25021 TGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AA 25078 |||| || || ||||||| |||| || ||||| ||||| || ||||| || || || Sbjct 2711311 TGACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCTGATACCATCGA--CAATGTCAA 2711368 Query 25079 G-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCG 25137 | | || | ||| ||||| || || || || ||||| || ||||| | ||||| |||| Sbjct 2711369 GTCGAAGATTCAG-GACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTGATTTTCGCCG 2711427 Query 25138 GCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGC 25197 |||| || | || |||| ||||| | |||||||||||| || || || ||||| | Sbjct 2711428 GCAAGCAGCTTGAGGATGGCCGCACCCTTTCCGATTACAATATCCAGAAGGAGTCCACTC 2711487 Query 25198 TACATTTAGTGCT 25210 | ||| | || || Sbjct 2711488 TCCATCTCGTCCT 2711500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327910219855