Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq13 122 2e-22 seq10 111 3e-19 seq14 107 4e-18 >seq13 Length=4347623 Score = 122 bits (134), Expect = 2e-22 Identities = 432/668 (65%), Gaps = 9/668 (1%) Strand=Plus/Plus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || |||||||| ||||||||||||||||||||||| || | || ||||| || | | Sbjct 1942902 GTCGGCTCTCTGTCTGGTGGTTGGAAGATGAAGCTGGCTCTGGCCCGAGCCATGCTTCAG 1942961 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 ||||| |||||||| || || || || || |||||||| | || | ||||| | || Sbjct 1942962 CGTGCTGATGTCCTTCTCCTGGACGAACCTACCAACCATCTTGATGTCGCCAACATCGCA 1943021 Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGAC 279875 ||||| | | |||||| | | || || | | || || || || || |||||| Sbjct 1943022 TGGCTTGAGAACTACCTCAAGACTCATCCCGATATCACCTCTCTGATCGTGTCCCACGAC 1943081 Query 279876 TCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTC 279935 ||||| ||||| || || | ||| |||| ||||| |||| || |||||| Sbjct 1943082 TCTGGTTTCCTCGACAATGTTACCACTGACATCTACCACTACGAGCCTAACAAGAAGCTG 1943141 Query 279936 TCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCCTAC 279995 || ||| || ||| || |||| || || | | || || ||||| ||| Sbjct 1943142 GCCTGCTACAAGGGTAACTTGGCTGCCTTTGTCGAGATCCGACCCGAGGCCAAGAGCTAT 1943201 Query 279996 TATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGA-GGG 280054 || |||| || | ||| || | ||| | |||||| || ||| ||| || || Sbjct 1943202 TACACCCTGTCGGCCTCCAACGTCCAGTTCAAGTTCCCTCCTCC-CGGTATCTTGACAGG 1943260 Query 280055 CATCACATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTTATCCCAA 280114 ||| || | | || || || || | | |||||||| | || ||| | Sbjct 1943261 TGTCAAGTCCATGACCCGTGCCATTATCCGCATGAGCAACGTCTCCTACACCTA-CCCGA 1943319 Query 280115 TGGCCCCAA---CATC--TTCAGCAGTGTCAACTCGCAGGTTTCTATGAACTCACGGATT 280169 |||| ||| |||| | || || || | ||| | | || || || || Sbjct 1943320 AGGCCACAAAGCCATCCTTGCATGAG-GTTTCTTGCCAGCTGACCCTGTCTTCCCGTGTT 1943378 Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 | ||||||| ||||| || || || ||||| || || ||||| | || || || ||| Sbjct 1943379 GCCATCATTGGCCCCAACGGAGCTGGCAAGTCGACTCTCATCAAGCTGCTTACCGGTGAG 1943438 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 ||| | ||| || || |||||| |||||| |||| || | ||| || Sbjct 1943439 ACCATTCCTACTACCGGAAAGGTCGAGAAGCACCCCAACTTGCGTATCGGCTACATCAAG 1943498 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 ||||||||| | | ||| | |||| || || || | |||||| ||||| ||| | ||| Sbjct 1943499 CAGCACGCTCTGGAGCACGTTGAGATGCATCTCGAGAAGACTCCCAACCAGTACCTCCAG 1943558 Query 280350 TGGCGCTA 280357 ||||| || Sbjct 1943559 TGGCGTTA 1943566 >seq10 Length=5928648 Score = 111 bits (122), Expect = 3e-19 Identities = 531/830 (64%), Gaps = 33/830 (4%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||||||||| ||||||||||||||||||||| | | Sbjct 4470391 TCGAAGAAGTTGGTCTTGCCACCCAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGCG 4470450 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTAC--GAAGATGCGGTCTGCCACAAACTCCA 251680 | ||||| ||| | ||| || || || ||||| ||||| || || ||||| | Sbjct 4470451 GACTTGTAGACCTTCTCGTTGCCGAGGGCGACCAGAAGA--CGGTCAGCGACGAACTCGA 4470508 Query 251681 GATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGA 251740 ||||| ||| || || | ||||||||| | | || || | |||||| | Sbjct 4470509 TGTACTGCTTCATGAGATCGGCGTTCATGCCGAGAAGGGCGCAGGGGAGAGCCTCAGTCA 4470568 Query 251741 TGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG--TGCCAG 251795 ||| |||| || ||| || || || | || ||| | ||||| ||| || Sbjct 4470569 GGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATGTCCTGGATGACCTGCTTGCTAG 4470628 Query 251796 AGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTC 251855 || || || || | |||| ||||| | |||| | ||| |||||||| Sbjct 4470629 -CACGGC----CCTTGAGGTGGGAGTGGAGGAGGCAGGCAAAGTCGGTGTGAAGACCCTC 4470683 Query 251856 GTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 || ||| || |||||||| || | ||| || ||||| | ||||| ||| |||| Sbjct 4470684 ATCACGAGATATTAACTCGTTAGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTGAG 4470743 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAAC 251975 ||||||||| | ||||| || ||| | | ||||||||| | | ||||| Sbjct 4470744 CCAGAAGATGGAAGCAAAGGCACCGCTGAAAAAGATACCCTCGACGGCAGCGAAGGCAAC 4470803 Query 251976 AAGGCGCTCAGCAAACGA------CTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGC 252029 || |||| ||||| || ||||||||| || | | || ||||| | || Sbjct 4470804 GAGACGCTGGGCAAAGGAAGAGTCCTTGTCCTG-GA-TCCATCGGATG-GCCCAGTCGGC 4470860 Query 252030 CTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATC 252089 |||||| | | ||||| || || || || | ||||| || | |||| || | Sbjct 4470861 CTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTTCGCTGGGAAGG 4470920 Query 252090 GTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAA 252149 |||| ||| | |||| || || ||||| |||| || |||||| || | | Sbjct 4470921 CTCCTTGATATAGGTGTCAATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCAT 4470980 Query 252150 CATCTGGTAAGCATAGA---ATAGACGCGCGGAAGGGTCGGTGACTT--CCGTGGAAAAG 252204 |||||| || | |||| || || | ||| || || | ||| | ||| ||| | Sbjct 4470981 GATCTGGAAACCGTAGAAGCATCGAGCCTCGG--GGATCTG-GACCTCGCCGCTGAATCG 4471037 Query 252205 TTGTTTGCAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTC 252264 | ||| |||||| | || ||||| || | | ||||||||| |||||||| Sbjct 4471038 --CTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCGGCAAAGAAGGCAAGAATGTGA 4471095 Query 252265 TTGATGAAGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTC 252324 ||||||| |||| ||| | | || || ||||||| | |||| | Sbjct 4471096 GAGATGAAGAACTGCTCGTCGGAGGTCAGGCGGTTGTTCCAGTCGTGGAGATCCTTGGAC 4471155 Query 252325 AGAGGAACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACAT 252374 ||| || || ||| | |||||||| | || | | |||||||||||||| Sbjct 4471156 AGATCAATCTCCTCCGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 4471205 >seq14 Length=3440514 Score = 107 bits (118), Expect = 4e-18 Identities = 165/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || |||| || || || ||||| ||||| || |||||||| || ||||| ||||| Sbjct 1978549 CTCTCGTATTGCCGTTATCGGTCCCAACGGTGCCGGCAAGTCTACTCTGATCAACGTCCT 1978608 Query 280220 GACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279 ||||| ||| | |||| ||||| | | |||| ||||| || || || Sbjct 1978609 CACTGGTGAGCTCATCCCCACCGAGGGTGAGATCTACCAGCACGAGAACATCCGTATCGC 1978668 Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339 ||| || |||||||||||| ||||| || ||||||||||||| |||||| | | Sbjct 1978669 CTACATCAAGCAGCACGCTTTCGCTCACATTGATAACCACCTGGACAAGACTCCCTCCGA 1978728 Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCGC 280391 ||||| |||||||| | | || | ||| |||||| ||| | |||| ||| Sbjct 1978729 GTACATCCAGTGGCGAT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCGC 1978780 Score = 96.9 bits (106), Expect = 7e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || |||||||| || ||||| ||||| || || || |||| |||||||| || ||| Sbjct 1977734 GGCGAGGATCTCTGCAACTGTACCTTCTCTCTTGCCTACGGTGCCAAGATTCTTCTCAAC 1977793 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | |||| ||||||| ||| | || || ||||| ||||||||| || | Sbjct 1977794 CAGACTCACCTCCGTCTCAAGCGAGGCCAGCGTTACGGTCTTTGCGGTCCCAACGGTTCC 1977853 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| |||||| ||||||||||| |||| ||| | | ||| ||||| | ||| Sbjct 1977854 GGAAAGTCCACTCTCATGCGCGCCATCAACAACGAGCAGGTTG-AGGGTTTCCCCAAGCA 1977912 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 ||||| | ||| || | || ||||||||| | ||||| Sbjct 1977913 GAGCGAGGTCAAGACTGTCTTCGTCGAGCACGACCTGGACTC 1977954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836576124297