Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq12 167 4e-36 seq10 167 4e-36 seq13 161 2e-34 seq14 125 1e-23 >seq12 Length=8749402 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || ||| ||| || |||||||| || ||| Sbjct 4927434 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 4927375 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || ||||||| || |||||||| || Sbjct 4927374 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGG 4927315 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 4927314 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 4927255 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || ||||| |||||||||||||| |||||||| Sbjct 4927254 TCAAGGGTGATGGTCTTCCCCGTAAGGGTCTTGACGAAGATCTGCAT 4927208 >seq10 Length=5928648 Score = 167 bits (184), Expect = 4e-36 Identities = 564/864 (65%), Gaps = 27/864 (3%) Strand=Plus/Plus Query 9938 GACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAG 9997 ||| || ||||||||||| || || || |||||||||||||| |||||| | || Sbjct 4470357 GACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAG 4470416 Query 9998 GGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAG 10057 || ||| |||||||||||| |||||||| ||| | ||| || ||||| Sbjct 4470417 AGAGATGTTCTCCATGAAGTCGAAGGGGTTGGCGGACTTGTAGACCTTCTCGTTGCCGAG 4470476 Query 10058 TGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCAT 10117 || | || |||||||| ||||||||||||||||| |||| || || | |||||| Sbjct 4470477 GGCGACCAGAAGACGGTCAGCGACGAACTCGATGTACTGCTTCATGAGATCGGCGTTCAT 4470536 Query 10118 GCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTC 10177 ||| | | | |||||||| || || | ||| |||| || ||| ||| || || Sbjct 4470537 GCCGAGAAGGGCGCAGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATC 4470596 Query 10178 CTCGACGATGCTCTTTACCACGT-CAAG---GGACAGCTTGTTCTCGAGCTTCGAATACA 10233 || |||| || | || | | | | || || || ||| | || | | Sbjct 4470597 AGTGATGATGTCCTGGATGACCTGCTTGCTAGCACGGCC----CTTGAGGTGGGAGTGGA 4470652 Query 10234 GGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAAC 10293 |||| |||| | ||| || ||||| || || || |||||||| || || Sbjct 4470653 GGAGGCAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGATATTAACTCGTTAGAGAAGG 4470712 Query 10294 CCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGC-GCAGAACGACCCGGAG 10352 ||||||||||||||| || || || |||||||| |||| ||| || | ||| | Sbjct 4470713 TCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTG 4470771 Query 10353 AACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGCGGTCGCGC 10412 || | | |||||| ||| | |||| ||||| |||| || ||||| ||| | Sbjct 4470772 AAAAAGATACCCTCGACGGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAAGAGTC-CTT 4470830 Query 10413 GAAAAGTATT--TCGA--GGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGAT 10468 | | || ||| |||||| | |||||||| | | | |||||| ||||| || Sbjct 4470831 GTCCTGGATCCATCGGATGGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAAT 4470890 Query 10469 AGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGA 10528 || | |||||| | | | |||| || |||| ||| | |||| ||||||||| Sbjct 4470891 GGCGTTGAAGAGGTAGGTTCGCTGGGAAGGCTCCTTGATATAGGTGTCAATGAGCAGGGA 4470950 Query 10529 GTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATACGTGCCG 10587 ||| |||| ||||| | |||| | |||| || ||||||| ||| || ||| Sbjct 4470951 GTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAT-CGAGCCT 4471009 Query 10588 AGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCA-GGTTCTCCATCACCATGCCATCG 10646 |||| | ||| || || || | | | || ||||||| | || ||||| || Sbjct 4471010 CGGGGATCTGGACCTCGCCGCTGAA-TCGCTCAACAAGGTTCTCGTTGACGATGCCGTCA 4471068 Query 10647 CTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAG---- 10702 | | ||||||||| | || ||||| ||||||| |||| || | |||| Sbjct 4471069 GAGGCGGCAAAGAAGGCAAGAATGTGAGAGATGAAGAACTGCTCGTCGGAGGTCAGGCGG 4471128 Query 10703 TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGT 10762 || ||| ||||| | ||||| | || | | ||||||| | |||||||||| Sbjct 4471129 TTGTTC----CAGTCGTGGAGATCCTTGGACAGATCAATCTCCTCCGCAGTCCAGAAAGA 4471184 Query 10763 GGCAACGGCCTTCTTGTACATCTG 10786 ||| ||||||||||||||||||| Sbjct 4471185 GGCCTCGGCCTTCTTGTACATCTG 4471208 >seq13 Length=4347623 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| ||| || || ||||| || |||||||| || ||| | Sbjct 2712021 CCACCACGCAGACGAAGAACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 2711962 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| || ||||| || |||| |||||||| || ||| Sbjct 2711961 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCAGCGAAGATAAGTCGCTGTTGGTCAGGAGGA 2711902 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| || |||||||| | ||| ||| ||||| ||||| | |||||| || Sbjct 2711901 ATTCCTTCCTTATCCTGAATCTTCGACTTCACGTTATCGATCGTGTCGGATGATTCCACC 2711842 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| ||||| ||||| ||||||||||| || ||||| Sbjct 2711841 TCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 2711795 Score = 149 bits (164), Expect = 1e-30 Identities = 163/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||||||||| | || | ||| || |||||||| || || ||||| || |||| | Sbjct 2711793 CCACCGCGAAGGCGGAGAACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 2711734 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || || || || ||| Sbjct 2711733 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGA 2711674 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||||| ||||||| ||||| ||||| | || || || Sbjct 2711673 ATGCCCTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACC 2711614 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | |||||| || || || || ||||||||||||| Sbjct 2711613 TCGAGGGTGATAGTCTTGCCAGTCAGGGTCTTGACGA 2711577 Score = 113 bits (124), Expect = 8e-20 Identities = 428/666 (64%), Gaps = 7/666 (1%) Strand=Plus/Minus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || |||||||||| |||||||||||| ||| | || || || |||||| || | | | Sbjct 1943566 TAACGCCACTGGAGGTACTGGTTGGGAGTCTTCTCGAGATGCATCTCAACGTGCTCCAGA 1943507 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || ||||| | ||| | || |||| |||||| |||||| || || ||| Sbjct 1943506 GCGTGCTGCTTGATGTAGCCGATACGCAAGTTGGGGTGCTTCTCGACCTTTCCGGTAGTA 1943447 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 || | ||| ||||| || | ||||||||| || | |||||| || || ||||||||| Sbjct 1943446 GGAATGGTCTCACCGGTAAGCAGCTTGATGAGAGTCGACTTGCCAGCTCCGTTGGGGCCA 1943387 Query 225158 ATCACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGT--TGCTGAAGAT--CTC 225213 || | | ||| ||||| |||| | | ||| | || | ||| | ||| || Sbjct 1943386 ATGATGGCAACACGGGAAGACAGGGTCAGCTGGCAAGAAACCTCATGC-AAGGATGGCTT 1943328 Query 225214 AGGGCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTGGA 225273 | | | | |||| | ||| ||| | || || ||||||||| | |||| Sbjct 1943327 TGTGGCCTTCGGGTAGGTGTAGGAGACGTTGCTCATGCGGATAATGGCACGGGTCATGGA 1943268 Query 225274 AGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTCAG 225333 | | ||| || || ||||| ||||||| ||| | | | || ||| Sbjct 1943267 CTTGACACCTGTCAAGATACCGGGAGGAGGGAACTTGAACTGGACGTTGGAGGCCGACAG 1943208 Query 225334 GTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAGGTG 225393 | ||| || ||||||||||| | | || || |||| || ||| || || Sbjct 1943207 GGTGTAATAGCTCTTGGCCTCGGGTCGGATCTCGACAAAGGCAGCCAAGTTACCCTTGTA 1943148 Query 225394 CTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAA 225453 | ||||| ||| |||||| || || | | | || ||| ||||| Sbjct 1943147 GCAGGCCAGCTTCTTGTTAGGCTCGTAGTGGTAGATGTCAGTGGTAACATTGTCGAGGAA 1943088 Query 225454 GCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGAT 225513 ||||||||||||||||| || | || | | | | | |||||||| | Sbjct 1943087 ACCAGAGTCGTGGGACACGATCAGAGAGGTGATATCGGGATGAGTCTTGAGGTAGTTCTC 1943028 Query 225514 GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTC 225573 |||||||| | |||| ||| || | ||||| |||||||||||||| || |||| || Sbjct 1943027 AAGCCATGCGATGTTGGCGACATCAAGATGGTTGGTAGGTTCGTCCAGGAGAAGGACATC 1942968 Query 225574 AGCATCAATG-AGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGG 225632 |||| | || || ||||| || | |||| ||||||||| ||||| || || ||||| | Sbjct 1942967 AGCA-CGCTGAAGCATGGCTCGGGCCAGAGCCAGCTTCATCTTCCAACCACCAGACAGAG 1942909 Query 225633 AGCCGA 225638 |||||| Sbjct 1942908 AGCCGA 1942903 >seq14 Length=3440514 Score = 125 bits (138), Expect = 1e-23 Identities = 441/671 (66%), Gaps = 41/671 (6%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | ||| ||| ||||||||||||| ||||| || |||||| Sbjct 1978743 CGCCACTGGATGTACTCGGAGGGAGTCTTGTCCAGGTGGTTATCAATGTGAGCGAAAGCG 1978684 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099 ||||| | ||| || || || ||||| |||| | | | | || || || Sbjct 1978683 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTCGGTGGGG 1978624 Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || | ||| || |||||||| ||||| || |||| |||||| ||||| ||||| || || Sbjct 1978623 ATGAG-CTCACCAGTGAGGACGTTGATCAGAGTAGACTTGCCGGCACCGTTGGGACCGAT 1978565 Query 225160 CACGCCAATCCGGGATGACATTGCAAC-CTG---CGAGTTCACGTTG--CTGAAGATCTC 225213 ||| |||| || || | || | | ||| ||| | || | ||| | | Sbjct 1978564 AACGGCAATACGAGA-GCCAAGAGAGCACTGGAAAGAGATGTCGGAGATCTGGGGCTTGG 1978506 Query 225214 AGG-GCCAGTTTGGTAAGCAAAGGCCA------CGCCACGCAGCTTCATGATGGCACGGT 225266 ||| |||| |||| |||| || | ||||||| |||||| | Sbjct 1978505 AGGTACCAG---GGTACTGGAAGGACATCTTGGTGGCACGCAG------GATGGCCTTGG 1978455 Query 225267 CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGT 225326 |||||| | | |||||| ||||| |||||||||||||| | ||| | || | | | Sbjct 1978454 CCTTGGTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAATTGGAACTCGATCTCGGAGG 1978395 Query 225327 CCTTCAGGTCGTAGTAAGAT---GCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGT 225383 | || || ||||||||| |||| ||| | | || || || |||| || || Sbjct 1978394 CACCGAGCTCATAGTAAGATCGGGCAG--AGGGGACACGCTG-GACAAAGGCAGCCAAGT 1978338 Query 225384 TTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACT 225442 | || ||| | ||||||||| | |||||| ||||| || ||| | ||| || Sbjct 1978337 TACCACGGTAGCGCTTGAGCTTGAAG---CGCTCGTAGTGAACGATGTGCTG-GCAGACG 1978282 Query 225443 GCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTT 225501 ||| |||||||||||||||||||| || |||||||| | || | | | | | Sbjct 1978281 TTGTCGAGGAAGCCAGAGTCGTGGGAGACGATGATGGAAGTGCAGG---GGGA-GTTGAT 1978226 Query 225502 GAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAG 225561 ||||| | |||||| ||||| | || |||| ||||| ||||| ||||| || Sbjct 1978225 GAGGTACTCCTCGAGCCACTTGACGTTCTTCACATCCAGATGGTTGGTAGGCTCGTCGAG 1978166 Query 225562 AAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCC 225621 |||||| || || | | || || || || || | ||||||||| ||||| || Sbjct 1978165 AAGCAGAATATCGGGGGCCTCGAAGACAGCACGGCACAGGGCCAGCTTCATCTTCCAACC 1978106 Query 225622 CCCGGACAGGG 225632 || || |||| Sbjct 1978105 ACCAGAGAGGG 1978095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622204155240