Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq11 403 3e-107 seq10 372 6e-98 >seq11 Length=4934405 Score = 403 bits (446), Expect = 3e-107 Identities = 1225/1871 (65%), Gaps = 69/1871 (4%) Strand=Plus/Plus Query 243743 AACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCA 243802 ||||| | ||| || |||| |||| || | ||||||||||||||| ||||| || || Sbjct 3279472 AACTGAATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCTGTCTTCAGACCG 3279531 Query 243803 CTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCC 243862 |||| || | ||||||| || | ||| ||| || | |||| Sbjct 3279532 AGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGG---------GTCC 3279582 Query 243863 TCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCC 243922 | || || |||||| |||||| ||| || | ||||| | || || || ||| Sbjct 3279583 TT---CATGTGGATGTTGAGAGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCCGCC 3279639 Query 243923 ATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGC 243982 || || || | ||| || ||||| | | |||||||||| | ||||| | Sbjct 3279640 ATCTGGACGACCTGGCGCTGGGAAATCTCCCAAACGGTCTTGTAGAGAGCCTTGACCTCA 3279699 Query 243983 TCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATG 244042 |||| | ||||||||| | || || || | | |||| | | |||| Sbjct 3279700 GCGGGAATATTGGGGATGTTCTGGATGGAACCGTTCTCAGCAATGATTCTGTTCTTCATG 3279759 Query 244043 TTATCGTTCCACAGGCCCA-AGCGCTCCAGCGCCTCGA----CCAGGTGCCTGTTCACCA 244097 ||| ||||||||||| | || | || ||| || ||||| | || || | Sbjct 3279760 GAATCAGACCACAGGCCCATATCGA-CGAGATCCTTGAGCAACCAGGGG----TTAACGA 3279814 Query 244098 CCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGC 244157 |||| ||||| || | || || || ||||| |||| ||| | | ||||||| || Sbjct 3279815 CCTGGAACTCGCCAGCGAGGACACGACGCTGATAGATATTGGAGGTATAAGGCTCGAAGC 3279874 Query 244158 TCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGAC 244217 ||| |||| ||||| ||||||| ||||| ||||| |||||||| | | |||||||| Sbjct 3279875 ACTCGTTGTTACCCAGGATCTGCGAAGTGCTAGCAGTGGGCATGGGGGCAAGCAGCAGAC 3279934 Query 244218 TGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCG 244277 |||| | || ||| || || | ||||| | ||||||||| | | | Sbjct 3279935 TGTTGCGGGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTCCCAGAGGTC-- 3279992 Query 244278 AGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGC 244337 ||||| | || | || ||||||||| ||||| || | |||| | |||| Sbjct 3279993 AGAGGGCTTCACTTT-------CCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAG 3280045 Query 244338 TGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTCGAGG 244396 ||||| | |||| | ||||||||| || || ||| |||| || | || |||| Sbjct 3280046 AGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGCTGCACGGAAGCAGT-GAGG 3280104 Query 244397 GCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT- 244455 || || | |||||||||||| |||||| |||||||| || || |||| | | || Sbjct 3280105 GCAGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTCTCGAGCCT--CAGGAGACT 3280162 Query 244456 -GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGG 244514 ||| || |||| || | ||| | ||||| || ||||| || |||| || |||| Sbjct 3280163 CGAAAGGCATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGGACACCGACACCAATGG 3280222 Query 244515 GTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCA 244574 | | ||||||| ||||| | ||||| || |||||||| ||| | ||||| | Sbjct 3280223 GCCGGTGTCGCATGTTGCTGTTGCGAGCTTCAGGAACGGGGTAGTGGTTCACATCGATGA 3280282 Query 244575 CCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACT 244634 | |||| |||||||| || | | ||| ||| ||| ||| ||||| || Sbjct 3280283 TCCTGTTCAGGTTGCGAACGACAGTCTGTGTGACCTCGTGTAGCTTCTGGAAGTCATA-- 3280340 Query 244635 CGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGT 244694 | ||| ||||| || | |||| || | ||||||| | ||| |||| Sbjct 3280341 -GCAGG---CCTCGTCGTAGTTGATG------AAAGAGGGAAGGGCGAGGGAGGCAAGGT 3280390 Query 244695 TGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGC 244754 ||||||| || ||||| || | | ||||| || |||||||||||| ||||| || Sbjct 3280391 TGCAGACAGCAACCTCATCAGGGGCACAGTACTCGATAATCTCGGTGCAAAGGTTGGAGC 3280450 Query 244755 ACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCA 244814 ||||| || |||| || || ||| |||| ||||||| ||||||||||||| Sbjct 3280451 TGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCA 3280510 Query 244815 TGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCT 244874 ||||||| || ||||| ||| || |||||| | | |||||| | | |||| Sbjct 3280511 TGAAGGGGTTGCCAGTCTCAGTCTGAGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCT 3280570 Query 244875 TGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGG 244934 | | ||| ||||| |||| || | ||| || |||||| ||||||||||| Sbjct 3280571 TCATGGTCTTGCGACCCTTACCAGCCTTCTCATACTTCTCGTACAGAGCCTCGAACTCCT 3280630 Query 244935 GGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCACTCGCCG 244993 || || ||| | |||||||| ||| || ||| ||||||||| |||| || ||| Sbjct 3280631 CACCGTAGCAGTCGGCGAGGCCGGGACAC-TCGTTGGGACACATGAGAGTCCAGTCACCG 3280689 Query 244994 CCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTG 245053 | || ||| | || ||||||||| ||||| |||||||| ||| |||| ||||| | Sbjct 3280690 TTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGA 3280749 Query 245054 GTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACG 245113 | | ||| ||| ||| |||||| | ||| || | || |||||||| || || Sbjct 3280750 GCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCG 3280809 Query 245114 TGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACC 245173 ||||||||||| | ||||| || | ||| || || ||||| ||||| ||||| || | Sbjct 3280810 TGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTATTGCCACCCTGATCGA-- 3280867 Query 245174 ATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229 | | ||| || |||||||| || || | || | ||||| ||| || Sbjct 3280868 --CGTATCGGGCAGTGTTGTTGAAGACACGGAGCATGGGGGTAACACCGTTGGAGGTACC 3280925 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTG-ATGGACATGCCTAGTC 245288 |||||| || |||||| | || || | | || | | || | | || ||| | | Sbjct 3280926 GTTGGTACCGGCGATGTAAGAACCAGTGGCACGGA-TTCGGTGCACGTTCAGGCCAATAC 3280984 Query 245289 CGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGC 245348 | || || |||||| || | ||| || |||||| || || || ||||| || | Sbjct 3280985 CACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTATCATAAATACCCTCAATAC 3281044 Query 245349 TGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGT 245408 ||||| |||||||| || || ||||| ||||| |||||||||| |||| | | || | Sbjct 3281045 TGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCTGGGGCTGGGGGGTACCCGCAT 3281104 Query 245409 TGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGA 245468 |||| || |||||| |||||| || ||| | |||||| | || ||| |||| || Sbjct 3281105 TGAAGAGGGTGGGGGAGGCGTGAGTGAAGAACTTGCTCGACATGAGGTTGTAAGTCTCGA 3281164 Query 245469 GCAGAGCGTCGATGTTGTCGCCGTGGAT-CTGCAGGGCGCACCTCATGAGGGTGTGCT-G 245526 | | | || |||||||| || ||| | | | | || | ||||| |||||| | Sbjct 3281165 GGACACGCTCAATGTTGTCACCCCAGATGCCGACAGCCACA-CGCATGATCATGTGCTGG 3281223 Query 245527 GGGCG-TC-TCGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTG 245584 ||||| || | || || || |||||| | ||| || ||||| || |||||| Sbjct 3281224 GGGCGCTCAACAATCTTGCCATC---AATCTTGAGGAGGTAAGATCGCTCAAGGGTCTTG 3281280 Query 245585 AACCCAAAGTA 245595 || |||||||| Sbjct 3281281 AAGCCAAAGTA 3281291 >seq10 Length=5928648 Score = 372 bits (412), Expect = 6e-98 Identities = 603/856 (70%), Gaps = 20/856 (2%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| || ||||||||||| ||| Sbjct 4471214 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCGGAGGAGATTGATCTG 4471155 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAA 42415 ||||||| || || ||| || | |||| |||| |||| ||| || Sbjct 4471154 TCCAAGGATCTCCACGACT-GGAACAACCGCCTGACCTCCGACGAGCAGTTCTTCATCTC 4471096 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| || |||||||| ||||||||||||||||| ||||| |||||||| | | Sbjct 4471095 TCACATTCTTGCCTTCTTTGCCGCCTCTGACGGCATCGTCAACGAGAACCTTGTTGAGCG 4471036 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| ||||| ||| | ||||| || ||||||||||| |||||||| || Sbjct 4471035 ATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGAT 4470976 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592 |||||| | ||||| ||| ||| || ||||||| |||| || ||| ||| || Sbjct 4470975 GGAGAACATCCACTCCGAGACCTACTCC---CTGCTCATTGACACCTATATCAAGGAGCC 4470919 Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652 | |||| | | || ||||| ||||| ||||| || || |||||| |||||||| Sbjct 4470918 TTCCCAGCGAACCTACCTCTTCAACGCCATTGAGACCATCCCTTGCATCCGCAAGAAGGC 4470859 Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712 |||||||| || |||||| || ||| | | || | | || | || || || Sbjct 4470858 CGACTGGGCCATCCGATGGATCCAGGACAAGGACTCTTCCTTTGCCCAGCGTCTCGTTGC 4470799 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 ||| | ||||||||||| ||||| ||| || ||||| || ||||||||||||||||| Sbjct 4470798 CTTCGCTGCCGTCGAGGGTATCTTTTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCAA 4470739 Query 42773 GCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || ||| || |||||||| || |||||||| ||||| | || | || |||| Sbjct 4470738 GAAGCGTGGTCTC-ATGCCCGGTCTGACCTTCTCTAACGAGTTAATATCTCGTGATGAGG 4470680 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCTCG 42890 | || || | ||||||||||||||||| ||| ||||||| ||| | || | Sbjct 4470679 GTCTTCACACCGACTTTGCCTGCCTCCTCCACTC---CCACCTCAAGGGCCGTGCTAGC- 4470624 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 ||| || ||| || ||||||||| || ||||| || ||| |||||||||| || Sbjct 4470623 AAGCAGGTCATCCAGGACATCATCACTGATGCCGTCACCATTGAGCAGGAGTTCCTGACT 4470564 Query 42951 CAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAG 43010 || | || ||| |||| ||||||||||| ||| |||||| |||||||| || Sbjct 4470563 GAGGCTCTCCCCTGCGCCCTTCTCGGCATGAACGCCGATCTCATGAAGCAGTACATCGAG 4470504 Query 43011 TACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTC-AGCCGCCTCTACAACACGCCGTG 43069 | |||||| |||| ||| ||| | | || | || | ||||||| | | Sbjct 4470503 TTCGTCGCTGACCGTCTTCTGGTCGCCCTCGGCAACGAGAAG-GTCTACAAGTCCGCCAA 4470445 Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 |||||||||||| |||||||||||||| ||| |||||||||||||| ||||||||||| Sbjct 4470444 CCCCTTCGACTTCATGGAGAACATCTCTCTGGGTGGCAAGACCAACTTCTTCGAGAAGCG 4470385 Query 43130 CGTCGCCGACTACCAG 43145 |||| ||||||||| Sbjct 4470384 TGTCGGTGACTACCAG 4470369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338999327920