Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq13 134 3e-26 seq10 118 3e-21 seq12 107 5e-18 seq17 91.5 3e-13 >seq13 Length=4347623 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | || || || ||||| || |||||| | Sbjct 2712021 CCACCACGCAGACGAAGAACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 2711962 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | ||| || || |||||||| || |||||||| | || Sbjct 2711961 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCAGCGAAGATAAGTCGCTGTTGGTCAGGAGGA 2711902 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| |||||||| || |||| |||||||| || || | ||| ||||| || Sbjct 2711901 ATTCCTTCCTTATCCTGAATCTTCGACTTCACGTTATCGATCGTGTCGGATGATTCCACC 2711842 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || |||||||||||||| || ||||| Sbjct 2711841 TCAAGGGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 2711795 Score = 116 bits (128), Expect = 9e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || ||||| || | ||| || || || || || ||||||||| Sbjct 2711793 CCACCGCGAAGGCGGAGAACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCG 2711734 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || |||||||| ||||| ||| | || Sbjct 2711733 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCAGGAGGA 2711674 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | ||| || || || Sbjct 2711673 ATGCCCTCCTTGTCCTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACC 2711614 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 ||||| ||||| ||||| || ||||| |||||||||| Sbjct 2711613 TCGAGGGTGATAGTCTTGCCAGTCAGGGTCTTGACGA 2711577 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || || ||||| | || || || || | || ||| || || || || ||||| Sbjct 2712252 TGACCGCCACGGAGACGGAGCACAAGGTGCAGGGTCGATTCCTTCTGAATGTTGTAGTCA 2712193 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | ||| ||||| || || || | || || || || ||||| || ||||| || Sbjct 2712192 GAGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGG 2712133 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || ||||| || || | ||||| || || |||| |||||| || || Sbjct 2712132 GGGATACCCTCCTTGTCCTGAATCTTGGACTTCACATTATCAATAGTATCGCTGGACTCG 2712073 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || || ||||||||||| || |||||||| Sbjct 2712072 ACCTCCAGAGTGATTGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 2712023 >seq10 Length=5928648 Score = 118 bits (130), Expect = 3e-21 Identities = 152/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178 |||||| | ||| ||| |||| || | | |||| ||||| |||||||||||||| Sbjct 4470575 GAGTTCCTGACTGAGGCTCTCCCCTGCGCCCTTCTCGGCATGAACGCCGATCTCATGAAG 4470516 Query 269179 CAATATATCGAATTCGTGGCTGATCGTATCTTCACG--GCACTCGGTTATGAGAAAGTGT 269236 || || ||||| ||||| ||||| ||| |||| | || ||||| | ||||| || | Sbjct 4470515 CAGTACATCGAGTTCGTCGCTGACCGT--CTTCTGGTCGCCCTCGGCAACGAGAAGGTCT 4470458 Query 269237 ACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACT 269296 |||| || || ||||||| ||| ||||| || || || | || ||||| |||| Sbjct 4470457 ACAAGTCCGCCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGGTGGCAAGACCAACT 4470398 Query 269297 TCTTCGAAAAGCGTGTCAGCGACTATCA 269324 ||||||| ||||||||| | ||||| || Sbjct 4470397 TCTTCGAGAAGCGTGTCGGTGACTACCA 4470370 >seq12 Length=8749402 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||||| || || ||||| || |||||| Sbjct 4927434 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 4927375 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || ||||| || ||||| || ||| Sbjct 4927374 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGG 4927315 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | ||| || || || Sbjct 4927314 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 4927255 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| |||||||| || || ||||||||||| |||||||| Sbjct 4927254 TCAAGGGTGATGGTCTTCCCCGTAAGGGTCTTGACGAAGATCTGCAT 4927208 >seq17 Length=2611553 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/182 (71%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| || || || || || | || || || ||||||||| Sbjct 1259123 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 1259182 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||| || ||| ||| || || || || |||||||| || | || || || Sbjct 1259183 AGTCGCTGCTG---ATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 1259239 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||| ||||| || ||||| ||||| ||| Sbjct 1259240 TCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 1259299 Query 288463 AA 288464 || Sbjct 1259300 AA 1259301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654143056526