Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq11 203 4e-47 seq10 131 2e-25 >seq11 Length=4934405 Score = 203 bits (224), Expect = 4e-47 Identities = 666/1021 (65%), Gaps = 28/1021 (3%) Strand=Plus/Plus Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974 ||||| || |||||| || | | |||||||||||| || || ||||| |||||||| Sbjct 3279820 AACTCGCCAGCGAGGACACGACGCTGATAGATATTGGAGGTATAAGGCTCGAAGCACTCG 3279879 Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034 |||||||||| ||| || | ||| || ||||||||||| || | || || ||||| Sbjct 3279880 TTGTTACCCAGGATCTGCGAAGTGCTAGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTG 3279939 Query 114035 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC 114094 ||| ||| | ||| | | | ||| |||| | |||||||| || | | | Sbjct 3279940 CGGGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTCCCAGAGGTCAGAGGGC 3279999 Query 114095 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTC 114154 | | | | |||||| || |||||||| ||||| | ||||| || || |||| || || Sbjct 3280000 TTCACTTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGGTG 3280059 Query 114155 TCGTATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATAC 114211 ||| || ||||| ||| || | | |||| || |||||| || || || Sbjct 3280060 GAGTAGGGACCCTCCTCCTTGGCGAGCTGCACGGA---AGCAGTGAGGGCAGCATGGTAG 3280116 Query 114212 ATTGTCTCAAAAATGCGAGCATTCATTGC-CTTG-GCCTCGTCGGAATCAAACGCGAGTC 114269 || |||||||| || | |||| || || | ||||| || || || | | | Sbjct 3280117 ATGGTCTCAAAGATCTGCTTGTTCA--GCTCTCGAGCCTCAGGAGACTCGAAAG-GCATG 3280173 Query 114270 GGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 114328 ||| | || || |||| || ||||| |||||||||| ||||| || || |||| | Sbjct 3280174 CGCAGAGCAAGGAAAGCATCGGCAAGACCCTGGACACCGACACCAATGGGCCGGTGTCGC 3280233 Query 114329 ATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 114388 || || || ||||| ||||| || ||| |||||| | ||| || || Sbjct 3280234 ATGTTGCTGTTGCGAGCTTCAGGAACGGGGTAGTGGTTCACATCGATGATCCTGTTCAGG 3280293 Query 114389 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC-TC 114447 || |||| || ||||| || || ||||| | | | ||| | | | | || || Sbjct 3280294 TTGCGAACGACAGTCTGTGTGACCTCGTGTAGCTTCTGGAAGTCATAGCAG-GCCTCGTC 3280352 Query 114448 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 114507 | |||| | |||||||||| || || || || || |||| |||||| Sbjct 3280353 GTAGTTGATGAAAGAGGGAAGGGCGAGGGAGGCAAGGTTGCAGACAGCAACCTCATCAGG 3280412 Query 114508 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 114567 || |||||| ||||| || || || | || || || |||||| || | |||||| Sbjct 3280413 GGCACAGTACTCGATAATCTCGGTGCAAAGGTTGGAGCTGCGAATGGTACCAAGGTTCTT 3280472 Query 114568 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 114627 || || ||| ||| || ||||||||| |||||| | || | || ||||| || Sbjct 3280473 CTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCTCAGT 3280532 Query 114628 TTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 114686 || | || ||| || || | ||||| | || | ||| || ||| ||| || | Sbjct 3280533 CTGAGCCTCGAGGATGGCATACCAGAGCTTCTG-GGCCTTCA---TGGTCTTG---CGAC 3280585 Query 114687 CCT------CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTG 114740 ||| ||| ||| ||||| ||| || || || ||||| ||||| | || | Sbjct 3280586 CCTTACCAGCCTTCTCATACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCGG 3280645 Query 114741 AGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCT 114800 ||| || || || | || || | ||||| ||| | ||| || ||| ||||||| Sbjct 3280646 CGAGGCCGGGACACTCGTTGGGACACATGAGAGTCCAGTCACCGTTCTTCTCGACACGCT 3280705 Query 114801 TCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 114860 |||||||||| || || ||||||||||| ||| || || ||| |||| | || || | Sbjct 3280706 TCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGAGCGCGAACCTCCTCCT 3280765 Query 114861 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 114920 || || || |||| || | || || | || ||| |||||||| || || |||| Sbjct 3280766 TGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGT 3280825 Query 114921 A 114921 | Sbjct 3280826 A 3280826 >seq10 Length=5928648 Score = 131 bits (144), Expect = 2e-25 Identities = 528/819 (64%), Gaps = 27/819 (3%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| || || ||||||||||||||||| ||||| || ||| ||| |||||||| Sbjct 4470372 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGAGAGATGTTCTCCAT 4470431 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGC-ACCCCAATCTGTTTGAG 125871 || || || ||||| || || | | | |||| | | | | | || Sbjct 4470432 GAAGTCGAAGGGGTTGGCGGACTTGTAGACCTTCTCGTTGCCGAGGGCGACC------AG 4470485 Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931 ||||| || | |||| |||| ||||||| ||| || | |||||| |||| || Sbjct 4470486 AAGACGGTCAGCGACGAACTCGATGTACTGCTTCATGAGATCGGCGTTCATGCCGAGAAG 4470545 Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991 | || ||||| || || | |||| ||| |||||| ||||| || | ||| Sbjct 4470546 GGCGCAGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGAT 4470605 Query 125992 GGCGTGAATGGTGTCCACCCCAG---GTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGC 126048 | | || ||| | | | || | | ||| | | | || ||| || ||| Sbjct 4470606 GTCCTGGATGACCTGCTTGCTAGCACGGCCCTTGAGGTGGGAGTGGAGGAGG--CA-GGC 4470662 Query 126049 AAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGG 126108 ||| || ||| |||||||| ||||| || || | || || |||||| ||| || || Sbjct 4470663 AAAGTCGGTGTGAAGACCCTCATCACGAGATATTAACTCGTTAGAGAAGGTCAGACCGGG 4470722 Query 126109 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCC 126168 ||||||||| |||||||| | |||||| || | | ||| | ||| ||| ||||| || Sbjct 4470723 CATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAAAAGATACC 4470782 Query 126169 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACC 126227 ||| || ||||| |||| |||||||| |||||||| | | | |||| | | || Sbjct 4470783 CTCGACGGCAGCGAAGGCAACGAGACGCTGGGCAAAGGA-AGAGTCCTTGTCCTGGATCC 4470841 Query 126228 ACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA 126287 | || ||||| | ||||| || ||| || |||| ||||| || || | |||| Sbjct 4470842 ATCGGATGGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTGAAGA 4470901 Query 126288 GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 126347 | | | | || || || ||||| || | || ||||| || || || ||| Sbjct 4470902 GGTAGGTTCGCTGGGAAGGCTCCTTGATATAGGTGTCAATGAGCAGGGAGTAGGTCTCGG 4470961 Query 126348 CGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 126406 ||||| | | ||| || | ||| | ||||||| | || || ||| ||||| Sbjct 4470962 AGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGATCTGG 4471020 Query 126407 ACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 126465 ||||| | || ||| | | | | ||||| || || || || || | ||||| Sbjct 4471021 ACCTC-GCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCGGCAAA 4471079 Query 126466 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTC 126522 || || || || | ||||| ||| || | | ||| || | |||||||| Sbjct 4471080 GAAGGCAAGAATGTGAGAGATGAAGAACTGCTCGTCGGAGGTCAGGCGGTTGTTCCAGTC 4471139 Query 126523 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 || |||||||| || ||||| | ||||||||||||||| Sbjct 4471140 GTGGAGATCCTTGGACAGATCAATCTCCTCCGCAGTCCA 4471178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353473062360