Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq11 306 4e-78 >seq11 Length=4934405 Score = 306 bits (338), Expect = 4e-78 Identities = 1101/1711 (64%), Gaps = 46/1711 (3%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| || || ||| || |||||||||||||| ||||||| | Sbjct 3281297 TACCAATACTTTGGCTTCAAGACCCTTGAGCGATCTTACCTCCTCAAGATTGATGGCAAG 3281238 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || ||||| || || || || | ||||| || || |||| || || || || Sbjct 3281237 ATTGTTGAGCGCCCCCAGCACATGATCATGCGTGTGGCTGTCGGCATCTGGGGTGACAAC 3281178 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || | ||| | | ||| || |||| | |||| | || ||| || Sbjct 3281177 ATTGAGCGTGTCCTCGAGACTTACAACCTCATGTCGAGCAAGTTCTTCACTCACGCCTCC 3281118 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956 || ||||| ||||| ||||| ||||| ||| ||| | || || || ||||| | ||| Sbjct 3281117 CCCACCCTCTTCAATGCGGGTACCCCCCAGCCCCAGCTCTCCTCATGCTTCCTTGTCGAC 3281058 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| ||| || || |||| || | |||||| ||||| | || || Sbjct 3281057 -ATGAAGGAGGACAGTATTGAGGGTATTTATGATACTCTCAAGACTTGTGCCATGATTTC 3280999 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076 || || || || || || | | || ||| | ||||||| ||||| ||||| Sbjct 3280998 CAAGATGGCTGGTGGTATTGGCCTGAACGTGCACCGAATCCGTGCCACTGGTTCTTACAT 3280939 Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 | ||||||||| || ||||||||||| | ||| |||||||| |||||||||||| | Sbjct 3280938 CGCCGGTACCAACGGTACCTCCAACGGTGTTACCCCCATGCTCCGTGTCTTCAACAACAC 3280879 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 || || ||||| || |||||||| | | | ||| | || || |||| || || Sbjct 3280878 TGCCCGATACGTCGATCAGGGTGGCAATAAGCGACCTGGTGCCTTTGCCATCTACCTTGA 3280819 Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256 |||||||||||| || || | ||| | |||||||| |||||||||||||| || Sbjct 3280818 GCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGA 3280759 Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316 || | || | ||||| ||| ||||||||| | || || || || ||||| || || Sbjct 3280758 GGTTCGCGCTCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGT 3280699 Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGT 94376 |||||| ||| | ||||| ||| | |||||||| || |||||||| || ||||| Sbjct 3280698 CGAGAAGAACGGTGACTGGACTCTCATGTGTCCCAACGAGTGTCCCGGCCTCGCCGAC-- 3280641 Query 94377 TTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAA 94436 || || ||| || || | |||| ||||| | | | ||||| | || Sbjct 3280640 ---TGCTACG----GTGAGGAGTTCGAGGCTCTGTACGAGAAGTATGAGAAGGCTGGTAA 3280588 Query 94437 GGTT---------ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 || | ||| | || |||||| ||| || ||| | || | ||| || Sbjct 3280587 GGGTCGCAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATCCTCGAGGCTCAGACTGA 3280528 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 ||| || | |||| ||| | | |||||| | ||| |||| |||| ||||||| || Sbjct 3280527 GACTGGCAACCCCTTCATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAGAAGA 3280469 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 |||| || || ||||| || || |||||||||||| ||||||| | | || | Sbjct 3280468 ACCTTGGTACCATTCGCAGCTCCAACCTTTGCACCGAGATTATCGAGTACTGTGCCCCTG 3280409 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCT 94666 | ||| ||||||| || ||||| | |||| || ||| || ||||| | | | || Sbjct 3280408 ATGAGGTTGCTGTCTGCAACCTTGCCTCCCTCGCCCTTCCCTCTTTCAT-CAA-----CT 3280355 Query 94667 AC-ACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTC 94725 || ||| |||| | || | || |||| | || | | || ||| Sbjct 3280354 ACGACGAGGCCTGC----TATGACTTCCAGAAGCTACACGAGGTCAC---ACAGACTGTC 3280302 Query 94726 TT---GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAAC 94782 | |||||||||||| | ||||| |||| ||||||||| || || || ||| Sbjct 3280301 GTTCGCAACCTGAACAGGATCATCGATGTGAACCACTACCCCGTTCCTGAAGCTCGCAAC 3280242 Query 94783 TCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTG 94842 ||| || || |||||||| || |||| ||||||||| | || || || | | Sbjct 3280241 AGCAACATGCGACACCGGCCCATTGGTGTCGGTGTCCAGGGTCTTGCCGATGCTTTCCTT 3280182 Query 94843 ATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAA 94902 |||| |||| | ||| ||| || || | |||| | | || || || Sbjct 3280181 GCTCTGCGCATGCCTTTCGAGTCTCCTGAGGCTCGAGAGCTGAACAAGCAGATCTTTGAG 3280122 Query 94903 AGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCA 94962 | ||| || | | ||| | | ||||| || | |||| ||| | || || Sbjct 3280121 ACCATCTACCATGCTGCCCTCACTGCTTCCGTGCAGCTCGCCA---AGGAGGAGGGTCCC 3280065 Query 94963 CACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGT 95022 || | ||| || || ||| |||| ||| | ||||||||| | ||| Sbjct 3280064 TACTCCACCTTCAAGGGCTCTCCCGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAAA 3280005 Query 95023 GTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGT 95082 ||||||||||| | || | |||||||| |||| | | | || | | || ||| Sbjct 3280004 GTGAAGCCCTCTGACCTCTGGGACTGGGAGTCTCTCAGGGAGCAGGTCAAGGAGCATGGT 3279945 Query 95083 GTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGC 95142 ||| ||||| | |||||||||||||| || ||| |||||||||| || Sbjct 3279944 ACCCGCAACAGTCTGCTGCTTGCCCCCATGCCCACTGCTAGCACTTCGCAGATCCTGGGT 3279885 Query 95143 AACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGG 95202 |||||||||| ||||| || | |||||||| | || | | || || ||||| || Sbjct 3279884 AACAACGAGTGCTTCGAGCCTTATACCTCCAATATCTATCAGCGTCGTGTCCTCGCTGGC 3279825 Query 95203 GAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGTGTGGG 95260 || |||| ||| | ||| | || ||| || |||| | |||| ||||| Sbjct 3279824 GAGTTCCAGGTCGTTAACCCCTGGTTGCTCAAGGATCT--CGTCGATATGGGCCTGTGGT 3279767 Query 95261 GTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAA 95320 ||| | |||||| | | | | ||||| ||| ||||||||||||| | | Sbjct 3279766 CTGATTCCATGAAGAACAGAATCATTGCTGAGAACGGTTCCATCCAGAACATCCCCAATA 3279707 Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATAC 95380 | || | || ||||||| |||||||||||||| |||||||| | |||||| | | Sbjct 3279706 TTCCCGCTGAGGTCAAGGCTCTCTACAAGACCGTTTGGGAGATTTCCCAGCGCCAGGTCG 3279647 Query 95381 TCGACCACGCGGCCGCCCGCGGGCCCTTCAT 95411 || | ||||||| ||| || ||||||| Sbjct 3279646 TCCAGATGGCGGCCGACCGAGGTGCCTTCAT 3279616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723094871320