Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq13 116 4e-21 seq12 111 1e-19 seq17 105 6e-18 seq10 104 2e-17 seq11 102 8e-17 >seq13 Length=4347623 Score = 116 bits (128), Expect = 4e-21 Identities = 139/186 (75%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| ||| | | ||||| ||| || ||||| || ||| Sbjct 2711763 GTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 2711704 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| ||||||||||| ||||| ||||||||||||||| ||| || |||| Sbjct 2711703 GCAAAGATCAGGCGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGGATCTTTGACTTG 2711644 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||| | | ||| || |||| ||| | || ||||| ||||| || Sbjct 2711643 ACGTTG-TCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTGCCAGTCAGGGT 2711585 Query 127096 TTTTAC 127101 || || Sbjct 2711584 CTTGAC 2711579 Score = 100 bits (110), Expect = 3e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || |||||||||||| | ||||| ||| || ||||| || || Sbjct 2711485 GTGGACTCCTTCTGGATATTGTAATCGGAAAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 2711426 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | |||| ||||||||||| ||||| ||||||||||||||| || ||| |||| Sbjct 2711425 GCGAAAATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTG 2711366 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCA 127091 | | |||| ||| || | ||| || |||| ||| | || ||||| |||| Sbjct 2711365 ACATTGTCGATGGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCCGTCA 2711311 >seq12 Length=8749402 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| || ||||| ||| || ||||| || ||||| | Sbjct 4927399 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 4927340 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||| | ||||||||| ||||| || ||||||||||||||| ||| || ||||| ||| Sbjct 4927339 GATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 4927280 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 | |||| |||||| | | ||| || || | ||| | || || || || || || || | Sbjct 4927279 G-TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTCCCCGTAAGGGTCTTGA 4927221 Query 127101 CAAAAATCTGCAT 127113 | || |||||||| Sbjct 4927220 CGAAGATCTGCAT 4927208 >seq17 Length=2611553 Score = 105 bits (116), Expect = 6e-18 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || ||||| || |||||| |||||| |||||||||||| || || ||||||||||| Sbjct 1259155 ATCCTCAAGCTGCTTGCCAGCGAAGATCAGTCGCTGCTGATCCGGGGGAATGCCCTCCTT 1259214 Query 127018 GTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 |||| ||| || ||||| | || | |||||||| |||||| |||| ||| | Sbjct 1259215 GTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGAT 1259274 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 || ||||| ||||| || || || ||| Sbjct 1259275 GGTCTTGCCCGTCAGGGTCTTCACGAAA 1259302 >seq10 Length=5928648 Score = 104 bits (114), Expect = 2e-17 Identities = 344/528 (65%), Gaps = 23/528 (4%) Strand=Plus/Minus Query 47061 GAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCAT--GAAGTACATTGAAAACG 47118 |||| ||| || ||| | |||| |||||||| |||||||| || | | | | | | Sbjct 4470887 GAGACCATCCCTTGCATCCGCAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGACAAG 4470828 Query 47119 AAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCT 47178 | | || || || || | ||| | | || ||||| ||||||||| |||| ||| Sbjct 4470827 GACTCTTC-CTTTGCCC-AGCGTCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTTTTCA 4470770 Query 47179 CGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGT 47238 || |||||| | || || | | || | || | |||||||| || || | Sbjct 4470769 GCGGTGCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCT 4470710 Query 47239 TTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACT 47298 | |||||| |||| || | || || || || |||||| |||||||||| ||| | Sbjct 4470709 TCTCTAACGAGTTAATATCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGCCTCCTC- 4470651 Query 47299 ACAACACTAGAGTCGATCAAAAGTTGGACGTGC---CCACC--GTCAGC---GACATGTT 47350 |||| | | | ||| || ||||| | | | |||| | ||||| | Sbjct 4470650 ----CACTC----CCACCTCAAG--GGCCGTGCTAGCAAGCAGGTCATCCAGGACATCAT 4470601 Query 47351 TGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGT 47410 | || |||||| |||||||| |||||| | | |||||||| ||| | | | Sbjct 4470600 CACTGATGCCGTCACCATTGAGCAGGAGTTCCTGACTGAGGCTCTCCCCTGCGCCCTTCT 4470541 Query 47411 GGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGT 47470 || |||||||| || | |||| |||||||||| || ||||| ||||| || || || Sbjct 4470540 CGGCATGAACGCCGATCTCATGAAGCAGTACATCGAGTTCGTCGCTGACCGTCTTCTGGT 4470481 Query 47471 TCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACAT 47530 || | ||| | ||| | ||| || || ||||| || ||| | ||||| Sbjct 4470480 CGCCCTCGGCAACGAGAAGGTCTACAAGTCCGCCAACCCCTTCGACTTCATGGAGAACAT 4470421 Query 47531 TTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 || || | |||||||||||||| ||||||||||| ||||| || || Sbjct 4470420 CTCTCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 4470373 >seq11 Length=4934405 Score = 102 bits (112), Expect = 8e-17 Identities = 230/343 (67%), Gaps = 12/343 (3%) Strand=Plus/Plus Query 145852 TTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGCCATGT---CTATCATG 145908 || ||||| ||| |||||||||||| | | | |||||||| ||||| | | | | | Sbjct 3279595 TTGAGAGACTGGGACTGATCAATGAAGGCACCTCGGTCGGCCGCCATCTGGACGACCTGG 3279654 Query 145909 CACTTTGATTTAATTTCCCATGCGGTTTTAAAGAGATCCTTGACGTGCTGGGGTATTTCG 145968 | || || ||| ||||| |||| || ||||| ||||||| | ||| || | | Sbjct 3279655 CGCTGGGA---AATCTCCCAAACGGTCTTGTAGAGAGCCTTGACCTCAGCGGGAATATTG 3279711 Query 145969 TCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGCA---ATTCTGGAGTG 146025 |||||||| | || || || || || | ||| |||| || | || || Sbjct 3279712 GGGATGTTCTGGATGGAACCGTTCTCAGCAATGATTCTGTTCTTCATGGAATC---AGAC 3279768 Query 146026 TAAATGTTCAAGTCTACGAGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCG 146085 | | | || || ||||| |||||| | | |||| || ||||| |||||||| Sbjct 3279769 CACAGGCCCATATCGACGAGATCCTTGAGCAACCAGGGGTTAACGACCTGGAACTCGCCA 3279828 Query 146086 GCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCG 146145 ||||| || || | | |||| | ||| ||| | |||||||| ||||||||||||| Sbjct 3279829 GCGAGGACACGACGCTGATAGATATTGGAGGTATAAGGCTCGAAGCACTCGTTGTTACCC 3279888 Query 146146 AGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCA 146188 || ||||||| || |||| || |||||| || | ||||| Sbjct 3279889 AGGATCTGCGAAGTGCTAGCAGTGGGCATGGGGGCAAGCAGCA 3279931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500698956080