Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq11 120 5e-22 >seq11 Length=4934405 Score = 120 bits (132), Expect = 5e-22 Identities = 447/680 (66%), Gaps = 18/680 (3%) Strand=Plus/Plus Query 203843 TCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGC-TTCTCAGATAGTACATGCCGG 203900 || || || |||||||||| | || |||||| ||||| ||| ||| ||||||||||| | Sbjct 3279463 TCGACAGTAAACTGAATGG-GAGCAGCGGCAG-CCTGCGTTCGCAGGTAGTACATGCCTG 3279520 Query 203901 TCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGT 203960 |||| || || || ||| ||| | ||||||| | | |||| || | |||||| Sbjct 3279521 TCTTCAGACCGAGCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGT 3279580 Query 203961 CGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCC 204019 | |||||| ||||| ||||||||| || || ||| ||||| || || || || ||| Sbjct 3279581 CCTTCATGTGGATGTTGAGAGACTGGGACTGATCAATG-AAGGCACCTCGGTCGGCCGCC 3279639 Query 204020 ATATTGATAA--TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077 || | || | ||| ||| ||||||||||| || |||||| | | | || | Sbjct 3279640 ATCTGGACGACCTGG--CGCTGGGAAATCTCCCAAACGGTCTTGTAGAGAGCCTTGACCT 3279697 Query 204078 GTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136 || | || | | || || ||| || ||||| || || || | ||| || || Sbjct 3279698 CAGCGGGAATAT-TGGGGATGTTCTGGATGGAACCGTTCTCAGCAATGATTCTGTTCTTC 3279756 Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATC 204196 | || ||||| ||||| || || ||| | || |||||| | || | Sbjct 3279757 ATGGAATCAGACCACAGGCCCATATCGACGAGATCCTTGAGCAACCAGGGGTTAACGACC 3279816 Query 204197 TGAAAGTCTCCGGACAGCACCCCTCGGGTGA-ACAGGTTGTTGGTGAATGGTTCGAACGC 204255 || || || || | || || | | | ||| | | ||| ||| | || ||||| Sbjct 3279817 TGGAACTCGCCAGCGAGGACACGAC-GCTGATAGATATTGGAGGTATAAGGCTCGAAGCA 3279875 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 ||||||||| || | ||||| | ||||| || ||||||||||| || || ||||| Sbjct 3279876 CTCGTTGTTACCCAGGATCTGCGAAGTGCTAGCAGTGGGCATGGGGGCAAGCAGCAGACT 3279935 Query 204316 GTTGCGCACACCGTATTTTTGGACCCTGC-GCTTCAGAGAGGTCCAGTCGTGCATCGCAC 204374 |||||| ||| | | | || ||||| | | ||||| |||||| | || Sbjct 3279936 GTTGCGGGTACCATGCTCCTTGA-CCTGCTCCCTGAGAGACTCCCAGTCCCAGAGGTCAG 3279994 Query 204375 TGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGT 204434 ||| ||||| ||||||||||||||| | || || | | | | || ||||||| Sbjct 3279995 AGGGCTTCACTTTCCACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGA 3280054 Query 204435 ACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCAC-GAGGCGGCCATGGCGTGATAG 204493 | || | || || ||||| | || ||| ||||| || || | | ||| || | Sbjct 3280055 AGGTGGAGTAGGGACCCTCCTCCTTGGCGAGC-TGCACGGAAGCAGTGAGGGCAGCATGG 3280113 Query 204494 TACATGGTCTCAAAGATCTG 204513 || ||||||||||||||||| Sbjct 3280114 TAGATGGTCTCAAAGATCTG 3280133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155031029520