Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq13 138 3e-27 seq12 107 5e-18 >seq13 Length=4347623 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| ||||| |||||||| |||| ||||||||| | ||| | || || Sbjct 2712006 AGAACCAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTTCGGCCGTCC 2711947 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| || |||||||| || ||||| ||||| ||| ||||||||| ||| Sbjct 2711946 TCGAGTTGCTTGCCAGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATTCCTTCCTTATCC 2711887 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| ||||| | || ||| || || | ||||| ||| Sbjct 2711886 TGAATCTTCGACTTCACGTTATCGATCGTGTCGGATGATTCCACCTCAAGGGTGATGGTC 2711827 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || || || ||||| Sbjct 2711826 TTTCCAGTGAGAGTCTTGACGAAGATTTG 2711798 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| || ||||| ||||| || | ||||||||||| | || | ||||| Sbjct 2712234 AGCACAAGGTGCAGGGTCGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCATCC 2712175 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || ||||| || ||||||||||| || || || || ||| Sbjct 2712174 TCCAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC 2712115 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| |||||| || | || || | | || || |||| ||||| ||| Sbjct 2712114 TGAATCTTGGACTTCACATTATCAATAGTATCGCTGGACTCGACCTCCAGAGTGATTGTC 2712055 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || ||||| || || Sbjct 2712054 TTTCCAGTGAGAGTCTTGACAAAGATCTG 2712026 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || |||||||| |||||||| |||| ||||| || | | || | ||||| Sbjct 2711500 AGGACGAGATGGAGAGTGGACTCCTTCTGGATATTGTAATCGGAAAGGGTGCGGCCATCC 2711441 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||| || || |||||||| || ||| || || || ||| Sbjct 2711440 TCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCC 2711381 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || |||| ||| || | | || || || | ||||| ||| Sbjct 2711380 TGAATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTCAACCTCGAGGGTGATGGTC 2711321 Query 199598 TTACCCGT 199605 || ||||| Sbjct 2711320 TTGCCCGT 2711313 >seq12 Length=8749402 Score = 107 bits (118), Expect = 5e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || |||||| |||| ||||||||| || || | ||||| Sbjct 4927419 AGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 4927360 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || |||||||| ||||||||||| || || || || ||| Sbjct 4927359 TCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 4927300 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 4927299 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTC 4927240 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || || || || Sbjct 4927239 TTCCCCGTAAGGGTCTTGACGAAGATCTG 4927211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921343216139