Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 286 4e-72 >seq1 Length=6466812 Score = 286 bits (316), Expect = 4e-72 Identities = 444/632 (70%), Gaps = 12/632 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || || || | ||||| || |||||||| Sbjct 2288625 TCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCC 2288684 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | || | |||||||| || ||||||||||| || || || ||||| ||| Sbjct 2288685 TCCTCAATGGTCAAGAGAGAAACATCGAAGGTACCACCACCGAGATCGAAGATGAGGACG 2288744 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || | ||||| |||||||| || || || || || || || || || Sbjct 2288745 TTGCGCTCACCCTCGATCTTCTTGTCGAGACCATAGGCAATGGCAGCGGCGGTAGGCTCG 2288804 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || || ||| ||| ||||||||||| | ||||| || || || || || Sbjct 2288805 TTGATGATTCGGAGAACGTTGAGGCCAGCAATGAGACCGGCATCCTTGGTAGCCTGACGC 2288864 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| || || || ||||| |||| |||| ||| |||||| Sbjct 2288865 TGAGAGTCGTTGAAGTAGGCAGGAACGGTGACGACAGCGTTATTGACGGTCTCACCGAGG 2288924 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | ||| ||| ||||| |||||||| || || ||||| || | | Sbjct 2288925 TAAGACTCGGCGGTCTCTCGCATCTTGGTGAGAACCATGGAGGAGATCTCCTCGGGGGTG 2288984 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---G 7873 || ||| || || || || ||||| || || || || || || |||| | Sbjct 2288985 AAGGTCTTCTGCTCGCCCTTGAACTCAACCTCGATGATAGGCTT----GC--CACCCTTG 2289038 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 ||| | ||| | | | | ||||| ||| | ||||||| |||| | ||||| Sbjct 2289039 TCGATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGGGTCGGCGAACTTG 2289098 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | ||||| | |||||| ||||| || || ||||| ||||||||||||| |||||| Sbjct 2289099 CGACCGATCAAACGCTTGGCATCGAAGACAGTGTTGGTGGGGTTCATGGCAACCTGGTTC 2289158 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || || || ||||| ||||| || | || || || ||||| | || || || Sbjct 2289159 TTGGCGGCATCACCGATCAGACGCTC---GGTGTCGGTGAAACCGACGAAAGAGGGAGTG 2289215 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTC 8085 ||||| || || |||||||| || ||||| || Sbjct 2289216 GTTCGGTTACCCTGGTCGTTGGCGATAATGTC 2289247 Score = 170 bits (188), Expect = 2e-37 Identities = 352/519 (68%), Gaps = 11/519 (2%) Strand=Plus/Plus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| |||||||| ||||| | ||| || | || ||| | | || Sbjct 1904366 AGGTCCTCGAAACGGGCACGGGTGATGGACATGGTGAAGTCCTCACCATCGAAGAGAGAG 1904425 Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363 ||||| |||||||| | || || ||||| | || ||||| || ||||| || || Sbjct 1904426 TCAATCTCAATGGTGGCCTGGGCACCGGAAGAGAGGGTACGCTTGGCACGCTCGCAAGCA 1904485 Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423 ||||| | ||| || || ||||| | | |||||| | ||| ||||| || || | Sbjct 1904486 GTTCGGAGACGTCGGAGAGCACGGGCATCACCGGACAGATCCTTCTTGGTCTTGCGGCTG 1904545 Query 7424 AACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGT 7482 ||||| | | |||| |||| |||| | | |||||| || | |||||||| || || Sbjct 1904546 AACTCCTTCTTGCAGTGGTCGA-GGAGGTTGGTATCGAAGTCCTGACCACCCAGATGGGT 1904604 Query 7483 ATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATC 7542 || || ||||| |||||||| |||| ||| || | ||||| | | || ||||| Sbjct 1904605 GTCACCAGCGGTGGCTTTGACAGTGAAGACACCACCCTGGATGTTGAGGAGGGAGACATC 1904664 Query 7543 AAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATC 7602 || ||||||||||| || || | ||||| ||||| || | ||| | ||| | Sbjct 1904665 GAAAGTACCACCACCGAGATCGTAGATGAGAACGTTGCGCTC--CTTCTCAG-ACTTGCC 1904721 Query 7603 G------AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 | |||||||| ||||| || || || || || || || || ||||| || ||| Sbjct 1904722 GGAGCCAAGACCGTAGGCGATGGCGGCAGCAGTAGGCTCGTTGATGATACGGAGGACGTT 1904781 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 || || ||||| | | || || || || || ||||| || ||||| |||||||| Sbjct 1904782 GAGACCGGCAATGGAACCGGCGTCCTTGGTGGCCTGTCGCTGGTTGTCGTTGAAGTAGGC 1904841 Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||||| || | ||| || | | || ||||| || || Sbjct 1904842 AGGGACAGTGATGACGGCCTTCTCAACCTTCTTGCCAAG 1904880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132665034280