Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq11 255 7e-63 seq10 84.2 3e-11 >seq11 Length=4934405 Score = 255 bits (282), Expect = 7e-63 Identities = 967/1492 (65%), Gaps = 43/1492 (3%) Strand=Plus/Plus Query 105908 AACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCA 105967 ||||| || |||||| | | | ||||||| || | || || || || ||||| || Sbjct 3279820 AACTCGCCAGCGAGGACACGACGCTGATAGATATTGGAGGTATAAGGCTCGAAGCACTCG 3279879 Query 105968 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 106027 || ||||||| ||| || | ||| || || ||||| || || | || |||||||| Sbjct 3279880 TTGTTACCCAGGATCTGCGAAGTGCTAGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTG 3279939 Query 106028 CGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTG--AGCTTGG 106085 || ||| | ||||||| | ||| ||||| |||||||| || | || || Sbjct 3279940 CGGGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTCCCAGAGGTCAGAG-GG 3279998 Query 106086 TTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATG 106145 ||||| |||| |||| || || || || | || | || | |||||| |||| || | Sbjct 3279999 CTTCACTTTCC-ACATGTCGAACTGGAGAATACCCTCAGAGGCGGGAGAGCCCTTGAAGG 3280057 Query 106146 TCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATAC 106204 | |||| ||| | | | || | | ||| | || |||| || || || Sbjct 3280058 TGGAGTAGGGACCCTCCTCCTTGGCGAGCTGCACGGAA-GCAGTGAGGGCAGCATGGTAG 3280116 Query 106205 ATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC-AAATGCGTAGCG 106263 ||||| |||||||| | |||| ||| || ||| || || ||| || | ||| Sbjct 3280117 ATGGTCTCAAAGATCTGCTTGTTCAGCTCTCGAGCCTCAGGAGACTCGAAAGGCAT-GCG 3280175 Query 106264 GCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 106322 || | || || |||| || ||||| || ||||| | |||||| || | |||||||| Sbjct 3280176 -CAGAGCAAGGAAAGCATCGGCAAGACCCTGGACACCGACACCAATGGGCCGGTGTCGCA 3280234 Query 106323 TATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTA 106379 | || || | ||| || ||| ||||| || || || |||| | ||| | Sbjct 3280235 TGTTG--CTGTTGCG-AGCTTCAGGAACGGGGTAGTGGTTCACATCGATGATCCTGTTCA 3280291 Query 106380 GATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCT 106439 | || ||| ||| ||||| || || || || | | ||| | || | || Sbjct 3280292 GGTTGCGAACGACAGTCTGTGTGACCTCGTGTAGCTTCTGGAAGTCATA---GCAGGCCT 3280348 Query 106440 CTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 106496 | || | ||| | |||||||||| || || | ||||| ||||| ||||| Sbjct 3280349 CGTCGTAGTTGATGAAAGAGGGAAGGGCGAGGGAGGCAAGGTTGCAGACAGCAACCTCAT 3280408 Query 106497 CCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAAT 106556 | | |||||| | ||| || || || | |||||| || ||| || || | | Sbjct 3280409 CAGGGGCACAGTACTCGATAATCTCGGTGCAAAGGTTGGAGCTGCGAATGGTACCAAGGT 3280468 Query 106557 TCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 106616 |||| ||||| ||||| |||||| |||||||||||||||| |||| | || |||| Sbjct 3280469 TCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCAGTCT 3280528 Query 106617 CCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGG-- 106673 | ||||| | || ||| || || | ||| | | || | | || |||| ||| Sbjct 3280529 CAGTCTGAGCCTCGAGGATGGCATACCAGAGCTTCTGGGCCTTC----ATGGTCTTGCGA 3280584 Query 106674 CCCGTCCCT-CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCG 106732 ||| | || || ||| ||||| ||| || || || ||||||||||| |||| Sbjct 3280585 CCCTTACCAGCCTTCTCATACTTCTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCG 3280644 Query 106733 GAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGC 106792 | ||| || || || || ||||| | |||| ||| | ||| || ||| || ||| Sbjct 3280645 GCGAGGCCGGGACACTCGTTGGGACACATGAGAGTCCAGTCACCGTTCTTCTCGACACGC 3280704 Query 106793 TTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCG 106852 |||||||| || || |||||||| || | || || || | | ||| |||| || Sbjct 3280705 TTCATGAAGAGATCGGGAATCCAGAGAGCCAGGAACAGGTCGCGAGCGCGAACCTCCTCC 3280764 Query 106853 TCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGA 106912 | || ||||| || | ||||||||||| | || ||| |||||||| |||||||| Sbjct 3280765 TTGCCGTGGTTCTTGCGCAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGG 3280824 Query 106913 TAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCG 106969 |||| || | | || ||| | ||| | |||| || || || || ||| | Sbjct 3280825 TAGATGGCAAAGGCACCAGGTCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTG 3280884 Query 106970 TTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGA 107029 || || || || ||||| || ||| ||| | || ||| || || || || | Sbjct 3280885 TTGAAGACACGGAGCATGGGGGTAACACCGTTGGAGGTACCGTTGGTACCGGCGATGTAA 3280944 Query 107030 GATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATT 107089 || | |||| | | || | || || |||||||| |||||| ||| || || Sbjct 3280945 GAACCAGTGGCACGGATTCGGTGCACGTTCAGGCCAATACCACCAGCCATCTTGGAAATC 3281004 Query 107090 TGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATA 107149 ||||| | | ||||| |||| ||||| | || ||||||||| || ||| | Sbjct 3281005 ATGGCACAAGTCTTGAGAGTATCATAAATACCCTCAATACTGTCCTCCTTCATGTCGACA 3281064 Query 107150 AGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCG 107209 |||||||| ||| | ||| || || ||||| |||||||||||||| || | ||| Sbjct 3281065 AGGAAGCATGAGGAGAGCTGGGGCTGGGGGGTACCCGCATTGAAGAGGGTGGGGGAGGCG 3281124 Query 107210 TGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTT 107267 ||| ||| | | |||| ||||| || ||| ||||| | |||| ||||||| | Sbjct 3281125 TGAGTGA--AGAACTTGCTCGACATGAGGTTGTAAGTCTCGAGGACACGCTCAATGTTGT 3281182 Query 107268 CCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGC 107327 | || |||||||| ||||||||||| | ||||| ||||| || | | ||| Sbjct 3281183 CACCCCAGATGCCGACAGCCACACGCATGATCATGTGCTGGGGGCGCTCAACAATCTTGC 3281242 Query 107328 CATCGAGCCGTTGAAGA---TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 |||| | | |||| || || || ||||||||| |||| |||||||| Sbjct 3281243 CATCAATC--TTGAGGAGGTAAGATC-GCTCAAGGGTCTTGAAGCCAAAGTA 3281291 >seq10 Length=5928648 Score = 84.2 bits (92), Expect = 3e-11 Identities = 147/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| ||||||||||| || || || | || || |||||| || || Sbjct 4470660 GGCAAAGTCGGTGTGAAGACCCTCATCACGAGATATTAACTCGTTAGAGAAGGTCAGACC 4470719 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGA 117391 ||||||||||| |||||||| | ||| | || | ||| || | ||| ||| |||| Sbjct 4470720 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTGAAAAAGA 4470778 Query 117392 TACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCA 117450 ||||||| || || || |||| || |||| ||| ||||| ||| | |||| | Sbjct 4470779 TACCCTCGACGGCAGCGAAGGCAACGAGACGCTGGGCAAAGGA-AGAGTCCTTGTCCTGG 4470837 Query 117451 AACCATTTCATTGCCCATTTCGCCTTCTT 117479 | |||| || ||||| | |||||||| Sbjct 4470838 ATCCATCGGATGGCCCAGTCGGCCTTCTT 4470866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980674629080