Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 >seq1 Length=6466812 Score = 127 bits (140), Expect = 2e-24 Identities = 431/667 (65%), Gaps = 61/667 (9%) Strand=Plus/Minus Query 29767 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 29826 |||||| | ||| || | ||| || || || || || | ||| ||||| || || ||| Sbjct 3745580 GGAAAGTTGCGGGGTTCACGCTCCAGTTGCGTGTTGAGGGCTTCGACGTGGTCAAGATAG 3745521 Query 29827 ACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCC-GGTTCTAGCCCGGTGACGTGAGC 29885 ||||| ||||| |||| | ||| | | || || ||| | | | || ||| || || Sbjct 3745520 ACGTGTGCGTCGCCCATGACGTG-AGTGAGGCTGCCAGGTACCAACTCGCAGACATGCGC 3745462 Query 29886 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 29945 |||||||| || || | | ||||||||| ||||| || || || || || |||||||| Sbjct 3745461 CATCATGTGTGTCAGCAATGCGTAGCTGGCAATGTTGAATGGAACACCTAGGCCCATGTC 3745402 Query 29946 CCCCGACCTCTGGTAGAGCTGACACG--AGA--------------GCTCTC-----CGTC 29984 | || | ||||||||||||||| ||| | |||| |||| Sbjct 3745401 GCAAGATCGCTGGTAGAGCTGACAGTGTAGATGGCCCTGGGGCTTGGTCTCGGGGTCGTC 3745342 Query 29985 G--CT----------------CACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAG 30023 | || |||||| || || | ||||| |||||||| || || Sbjct 3745341 GTCCTTTCGTCGGGGGTATGACACGTAGAATTGGGCAAACATG---TGGCACGGTGGGAG 3745285 Query 30024 AGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGG 30083 |||| || ||| ||| ||||||||| | | ||| | || | || | ||| Sbjct 3745284 GACCATCTTCTTCAGGTCGGCGGGATTCCAGGCGGAAAGGATCAGACGACGATCATATGG 3745225 Query 30084 GTTG-TTC----CTGATGAGGTC-CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGA 30137 |||| ||| || ||| | ||||| ||||| || || ||| |||| Sbjct 3745224 GTTGGTTCGCAGCTTGTGAATAATCTCGGCG------AGCTGGTCGACTCCCTGGCCCGT 3745171 Query 30138 GTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACAC 30197 |||||| | | | ||| ||||||||| || || |||| ||||||||| |||||||| Sbjct 3745170 GTAGTCCGTCTTGGCGTCGACGTACTCTGCGCCAAAGTGCCGCCACTGGAAGCCGTACAC 3745111 Query 30198 CGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGA 30257 || || ||||| || | || | ||| | || ||| || || | || || | ||| Sbjct 3745110 GGGGCCAAGGTCGCCGACCTCGCGGTGGTTGAGGCCGAGGTTATCGAGGAACTCGCGGGA 3745051 Query 30258 ACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CC 30316 || ||| ||||||||||||| | || |||| ||| ||||| |||| || Sbjct 3745050 TCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAGGCTGGTGGAGGATGTGTTGCC 3744991 Query 30317 CTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGA 30376 ||| ||||||||| || ||||| | | ||| || |||||| | |||||| |||| Sbjct 3744990 CTC-GACGAACCAGAGGAGCTCGGCGATGACAGCGCGGGTAAAGACGCGCTTGGTGGTGA 3744932 Query 30377 GGAGGGG 30383 ||||||| Sbjct 3744931 GGAGGGG 3744925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617515339541