Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq13 102 6e-17 seq17 82.4 6e-11 >seq13 Length=4347623 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || ||||| ||||| ||||| || | ||| | || |||| ||||||||| ||||| Sbjct 2712213 TCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAG 2712154 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || |||||||| || || | ||| | ||||||||||| |||||| || ||| | Sbjct 2712153 ATAAGTCGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGAATCTTGGACTTCACATTA 2712094 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || | ||| ||||||| || || || ||||| || | ||| || ||| Sbjct 2712093 TCAATAGTATCGCTGGACTCGACCTCCAGAGTGATTGTCTTTCCAGTGAGAGTCTTGACA 2712034 Query 48756 AAAATCTGCAT 48766 || |||||||| Sbjct 2712033 AAGATCTGCAT 2712023 >seq17 Length=2611553 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 48579 TTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATC 48638 || || || ||||| || || ||| |||| | || || | |||||| || || || ||| Sbjct 1259123 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 1259182 Query 48639 AGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||||||| ||||||| ||||| |||||||||||| Sbjct 1259183 AGTCGCTGCTGATCCGGGGGAATGCCCTCCTTGTC 1259217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937521074491