Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20solani_20[genbank_20GCA_5F002215905.1_202017-07-07] 17 sequences; 45,813,297 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq11 325 7e-84 seq10 194 3e-44 >seq11 Length=4934405 Score = 325 bits (360), Expect = 7e-84 Identities = 1223/1884 (65%), Gaps = 92/1884 (5%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || |||||||| | ||| |||| ||||||| || || || ||||||||||| ||||| Sbjct 3279466 ACAGTAAACTGAATGGGAGCAGCGGCAGCCTGCGTTCGCAGGTAGTACATGCCTGTCTTC 3279525 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 || || ||| ||||||| | |||||| |||| ||| |||| | || | Sbjct 3279526 AGACCGAGCTT---CCAGCCGGCAAAGTGCAT-GCTGGTGA---TCTTGCCC---ATGGT 3279575 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 |||| | | |||| | ||| || ||||| ||| || ||||| | | Sbjct 3279576 GGGGTCCTTCATGTGG---------ATGTTGAGAGACTGGGACTGATCAATGAAGGCACC 3279626 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | ||| || ||||| | | || | | |||||| | |||||| ||||||||| ||| Sbjct 3279627 TCGGTCGGCCGCCATCTGGACGACCTGGCGCTGGGAAATCTCCCAAACGGTCTTGTAGAG 3279686 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGT 212845 | |||| || | || | |||||||||||| | || || | | ||| | Sbjct 3279687 AGCCTTGACCTCAGCGGGAATATTGGGGATGTTCTGGATGGAACCGTTCTCAGCAATGAT 3279746 Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905 | | |||| || ||| |||||| | | || ||||| || Sbjct 3279747 TCTGTTCTT---CATGGAATCAGACCACAGGCCCATATCGACGAGATCCTTGAGCAACCA 3279803 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 ||||| || | |||||| || || | ||| || | | ||| || | || || || || Sbjct 3279804 GGGGTTAACGACCTGGAACTCGCCAGCGAGGACACGACGCTGATAGATATTGGAGGTATA 3279863 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 ||||||| || ||||||||| ||||| ||||| | |||||| || ||||||||||| || Sbjct 3279864 AGGCTCGAAGCACTCGTTGTTACCCAGGATCTGCGAAGTGCTAGCAGTGGGCATGGGGGC 3279923 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085 | ||| |||||||| | || ||||| || | || || ||||||| Sbjct 3279924 AAGCAGCAGACTGTTGCGGGTACCATGCTCCTTGACCTGCTCCCTGAGAGACTCCCAGTC 3279983 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145 ||| | |||| | |||||| ||||||||||| ||||| | || || Sbjct 3279984 CCAGAGGTCAGAGGG---------CTTCACTTTCCACATGTCGAACTGGAGAATACC--- 3280031 Query 213146 GCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGC 213201 |||| |||| ||||| | | | ||||||||| || | ||||||||| |||| || Sbjct 3280032 -CTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGCT-GC 3280089 Query 213202 A-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260 | ||| || |||||||| | ||||||||| ||||| |||| | |||| |||| || | Sbjct 3280090 ACGGAAGCAGTGAGGGCAGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCT-CTCG 3280148 Query 213261 -GCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGAC 213319 ||||| || ||| ||| ||||| || |||| |||| || || |||||||| Sbjct 3280149 AGCCTCAGGAGACTCGAAAGGCATGCGCAGAGCAAGGAAAGCATCGGCAAGACCCTGGAC 3280208 Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAA 213378 |||| || ||||| | ||||| || ||| ||| |||| || | |||||| Sbjct 3280209 ACCGACACCAATGGGCCGGTGTCGCATGTTGCTGTTGCGAGCT-TCAGGAACGGGGTAGT 3280267 Query 213379 AGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTG-GTGACATGGGCCAGG 213437 ||| ||||||||| |||| |||||||| | | | | || ||||| | | || Sbjct 3280268 GGTTCACATCGATGATCCTGTTCAGGTTGCGAACGAC-AGTCTGTGTGACCTCGTGTAGC 3280326 Query 213438 TACTCGTGATTGAACACGTAGC---CCCCGTCCTGC---ACAAACTCAGGCAGGGCGATG 213491 | || | || | |||| || |||| | | || || ||||||| | Sbjct 3280327 TTCTGG------AAGTCATAGCAGGCCTCGTCGTAGTTGATGAAAGAGGGAAGGGCGAGG 3280380 Query 213492 CTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCAC 213551 ||| |||||||| || || ||||| | || | | |||||| || ||||||||||| Sbjct 3280381 GAGGCAAGGTTGCAGACAGCAACCTCATCAGGGGCACAGTACTCGATAATCTCGGTGCAA 3280440 Query 213552 AGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATC 213610 |||||| || || ||||| || ||||||| ||||| ||| ||| | |||| ||| Sbjct 3280441 AGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGATC 3280499 Query 213611 CTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAG 213668 ||||||||||||| ||||| || ||||| ||| | | | || || ||| |||| Sbjct 3280500 CTTGTAGAGCATGAAGGGGTTGCCAGTCTCAGTCTGAGCCTCGAGGAT--GGCATACCAG 3280557 Query 213669 AGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAG 213728 || | | |||||| | | | ||| | | || | ||| |||| ||||| Sbjct 3280558 AGCTTCTGGGCCTTCATGGTCTTGC-GACCCTTACCAGCCTT--CTCATACTTCTCGTAC 3280614 Query 213729 AGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATG 213788 || | | ||| || | || || | | || || ||||| |||||||||| Sbjct 3280615 AGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGGCCGGGACACTCGTTGGGACACATG 3280674 Query 213789 AGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGC 213847 || ||||||| |||| | |||| ||| | || |||||| || || || | ||| || || Sbjct 3280675 AGAGTCCAGTCACCGTTCTTCTC-GACACGCTTCATGAAGAGATCGGGAATCCAGAGAGC 3280733 Query 213848 GGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAA 213907 ||||||||| | | | ||| ||| || ||| |||||||| || || || Sbjct 3280734 CAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAA 3280793 Query 213908 GTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTT 213964 ||||||| || |||||||| ||||| | ||||||||||||||| || | || | || Sbjct 3280794 CTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTATT 3280853 Query 213965 GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGA--CGGGTACCAGC 214022 ||| ||||| || || | ||| ||||||||| || || | ||||| || Sbjct 3280854 GCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGGAGCATGGGGGTAACA-- 3280911 Query 214023 CCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATG 214082 |||||||| |||||||| || || || || || || | ||| | | | || | Sbjct 3280912 CCGTTGGAGGTACCGTTGGTACCGGCGATGTAAGAACCAGTGGCACGGATTCGGTGCACG 3280971 Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142 || || || ||||| || |||||| |||||||| || | | | ||| || Sbjct 3280972 TTCAGGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTATCATAA 3281031 Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG 214202 || || | || ||||| || | | || | | |||||| |||||||||||| | Sbjct 3281032 ATACCCTCAATACTGTCCTCCTTCATGTCGACAAGGAAGCATGAGGAGAGCTGGGGCTGG 3281091 Query 214203 GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGC 214262 | | || | ||||| || |||||| ||| || | | |||||| | || | ||| Sbjct 3281092 GGGGTACCCGCATTGAAGAGGGTGGGGGAGGCGTGAGTGAAGAACTTGCTCGACATGAGG 3281151 Query 214263 CTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCAC-CTCAT 214321 |||| ||||| ||||| |||| || ||| | ||| ||| | ||| Sbjct 3281152 TTGTAAGTCTCGAGGACACGCTCAATGTTGTCACCCCAGATGCCGACAGC-CACACGCAT 3281210 Query 214322 CAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCG 214378 | |||||||||||| | ||| | || ||| | |||||| ||||| || || Sbjct 3281211 GATCATGTGCTGGGGGCGCTC-AACAATC--TTGCCATCAATCTTGAGGAGGTAAGATCG 3281267 Query 214379 CTCCAGAGTCTTGAACCCAAAGTA 214402 ||| || |||||||| |||||||| Sbjct 3281268 CTCAAGGGTCTTGAAGCCAAAGTA 3281291 >seq10 Length=5928648 Score = 194 bits (214), Expect = 3e-44 Identities = 556/847 (66%), Gaps = 20/847 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || ||| ||||||||||| Sbjct 4470369 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGAGAGATGTTCTC 4470428 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | || || ||| | || ||| | |||| | Sbjct 4470429 CATGAAGTCGAAGGGGTTGGCGGACTTGTAGACCT-TCTCGTTGCCGAGGGCGACCAGAA 4470487 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || |||||| |||||||||| | |||||| | ||||||||| | |||| Sbjct 4470488 GACGGTCAGCGACGAACTCGATGTACTGCTTCATGAGATCGGCGTTCATGCCGAGAAGGG 4470547 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| | ||||| || || ||||||| ||| || ||||| || | || | Sbjct 4470548 CGCAGGGGAGAGCCTCAGTCAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATGT 4470607 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTT--GCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135 || | | || ||| | | | || | | | | || | ||| | |||||| Sbjct 4470608 CCTGGATG----AC-CTGCTTGCTAGCACGGCCCTTGAGGTGGGAGTGGAGGAGGCAGGC 4470662 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 |||||| |||| | || || || || || | | |||| |||||| ||||| || Sbjct 4470663 AAAGTCGGTGTGAAGACCCTCATCACGAGATATTAACTCGTTAGAGAAGGTCAGACCGGG 4470722 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||||| || | || ||||||||||| || | || || | || ||| ||||| || Sbjct 4470723 CATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAAAAGATACC 4470782 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315 ||| || || ||||| || ||| | || | || |||| || |||||| |||||| Sbjct 4470783 CTCGACGGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAAGAGTCCTTGTCCTGGATCCA 4470842 Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375 | |||||||| |||||||| |||||| || || ||||| ||||| |||||| Sbjct 4470843 TCGGATGGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTGAAGAG 4470902 Query 48376 CTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTC 48432 | | | || | ||| | |||||| | ||||||| | ||| |||| Sbjct 4470903 GTAGGTTCGCTGGGAAGGCTCCTTGATATAGGTGTCAATGAGCAG---GGAGTAGGTCTC 4470959 Query 48433 AGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTG 48492 ||||| | ||||| || ||||||||| ||||||||| | ||||| | ||| Sbjct 4470960 GGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGATCTG 4471019 Query 48493 CACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552 || || | ||||| ||| | || ||||| ||||| || || || || || ||||| Sbjct 4471020 GACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACGATGCCGTCAGAGGCGGCAAA 4471079 Query 48553 GAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTCCAGC 48608 ||||||||| | || | ||| |||||| | ||| || || |||||| Sbjct 4471080 GAAGGCAAGAATGTGAGAGATGAAGAACTGCTCGTCGGAGGTCAG-GCGGTTGTTCCAGT 4471138 Query 48609 CCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTT 48668 | || | || ||| ||| || | || ||| |||||||||| || || || || | Sbjct 4471139 CGTGGAGATCCTTGGACAGATCAATCTCCTCCGCAGTCCAGAAAGAGGCCTCGGCCTTCT 4471198 Query 48669 TGTACAT 48675 ||||||| Sbjct 4471199 TGTACAT 4471205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532602049280